Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00348 ATGTGGCAAACCCTGTTTGAGATTGATTCAAAATACGTGCCAATCAAACCTATTGGTCGCGGTGCTTATGGAATTGTGTGCTCTTCTGTGAATAAAGAGAGCAATGAGAAGGTTGCCATAAAAAAAATACAGAATGCCTTTGAGAACCGGATTGATGCGCTGAGGACTTTGCGCGAACTCAAGCTTCTTCGCCACCTTCACCATGAGAATGTGATTGCTTTGAAGGACATTATGATGCCTGTTCACAGGAATAGTTTCAAGGATGTCTATCTGGTTTATGAACTCATGGACACGGATTTGCACCAGATTATTAAGTCTTCTCAAGCACTGTCTAATGATCACTGCCAGTATTTCCTCTTTCAGTTGCTTCGTGGATTGAAATATCTTCATTCTGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATCAACGCAAATTGTGACCTAAAAATATGTGATTTCGGGTTGGCAAGAATTAACTGCAGCAAGAACCAGTTCATGACCGAGTATGTTGTGACTCGGTGGTATAGGGCACCAGAACTCCTACTCTGCTGTGACAACTACGGGACATCCATTGATGTTTGGTCAGTTGGATGCATCTTTGCTGAGCTTCTTGGCCGAAAACCGATTTTCCCTGGTTCAGAGTGTCTCAACCAGCTGAAATTGATCATCAATATCCTTGGTAGTCAAAGGGAGGAAGATATTGAGTTCATTGATAATCCAAAGGCAAAAAAGTATATCAAATCACTTCCTAGTTCTCCTGGAACTCCCTTTTCGCGACTTTATCCTAATGCACATCCATTGGCAATTGATCTTCTGGCAAAGATGCTTGTTTTCGATCCAACAAAGAGGATCAGTGTCAATGAAGCGCTTCAACACCCTTACATGGCCCCTCTATACGATCCTAACTGTGACCCCCCAGCTATCATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGATGATAAGGGAGATGATGTGGAAAGAAATGCTTCATTACCATCCTGAATCTGCCATGGAGAGTTCAGGGCTGTGCTAA 1056 0.4261 MWQTLFEIDSKYVPIKPIGRGAYGIVCSSVNKESNEKVAIKKIQNAFENRIDALRTLRELKLLRHLHHENVIALKDIMMPVHRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARINCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKKYIKSLPSSPGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVNEALQHPYMAPLYDPNCDPPAIIPIDLDIDEDLGEEMIREMMWKEMLHYHPESAMESSGLC 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00348 351 SMART serkin_6 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00348 351 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 11 316 - -
Phco7g00348 351 CDD STKc_TEY_MAPK 6 341 - -
Phco7g00348 351 FunFam Mitogen-activated protein kinase 96 325 - -
Phco7g00348 351 ProSitePatterns Protein kinases ATP-binding region signature. 18 42 IPR017441 GO:0005524
Phco7g00348 351 SUPERFAMILY Protein kinase-like (PK-like) 4 306 IPR011009 -
Phco7g00348 351 Gene3D Phosphorylase Kinase; domain 1 2 335 - -
Phco7g00348 351 Gene3D Transferase(Phosphotransferase) domain 1 96 325 - -
Phco7g00348 351 ProSitePatterns MAP kinase signature. 47 150 IPR003527 GO:0004707|GO:0005524|GO:0006468
Phco7g00348 351 ProSiteProfiles Protein kinase domain profile. 12 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00348 351 Pfam Protein kinase domain 13 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00348 351 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Phco7g00348 351 FunFam Mitogen-activated protein kinase 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00348 Phco-Chr7 2470278 2471797 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Phco7g00348 Pkinase 6.2e-71 CL0016