Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00347 ATGGCATCATCAAGTGGAAACTCTTCTATTTCCACCAAGATTCAGAGCTCGGGTTCTGAAGAAGATTTGCAGGTTCTGACGATGGACGAGAGAAAGAACAAAAGAAAGCAATCGAATCGCGAATCTGCGAGAAGATCTCGGATGCGAAAGCGTGAGCACTTGGAAGGTCTCAGGAAGCAAGTGTCACAGTTCACAAAGGAGAACAGGGAAATCCTGGCGACCACAGACATGACCACACAACACTATCTGAAAATCGAGGCAGAGAATTGTGTTCTGAGGGCCCAAATGGTTGAGCTTGACCAACGACTCCAATCGCTGAACGACATGATCGTCGACATCATGAACACAACCACCTTCTACGAAAGGGACTGTTATCTAACAAGTACACAAAATTTTACCAACACGCTATGTCTCAACCAACCTGTTTTTGAGTGGTGA 438 0.4566 MASSSGNSSISTKIQSSGSEEDLQVLTMDERKNKRKQSNRESARRSRMRKREHLEGLRKQVSQFTKENREILATTDMTTQHYLKIEAENCVLRAQMVELDQRLQSLNDMIVDIMNTTTFYERDCYLTSTQNFTNTLCLNQPVFEW 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00347 145 CDD bZIP_plant_GBF1 32 82 IPR045314 GO:0003700|GO:0006355
Phco7g00347 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 34 49 IPR004827 GO:0003700|GO:0006355
Phco7g00347 145 FunFam BZIP transcription factor 29 80 - -
Phco7g00347 145 Gene3D - 29 83 - -
Phco7g00347 145 SMART brlzneu 27 91 IPR004827 GO:0003700|GO:0006355
Phco7g00347 145 Pfam bZIP transcription factor 31 84 IPR004827 GO:0003700|GO:0006355
Phco7g00347 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 29 71 IPR004827 GO:0003700|GO:0006355
Phco7g00347 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 5 123 - -
Phco7g00347 145 MobiDBLite consensus disorder prediction 1 61 - -
Phco7g00347 145 SUPERFAMILY Leucine zipper domain 31 83 IPR046347 GO:0003700|GO:0006355
Phco7g00347 145 MobiDBLite consensus disorder prediction 1 23 - -
Phco7g00347 145 Coils Coil 54 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00347 Phco-Chr7 2457963 2458400 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Phco7g00347 bZIP_1 7.5e-10 CL0018