Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00309 ATGGATGATGCTGGGCATCGTGAAAATGGCAGGCACAAAGCCGATCAATTTAAACCTGCTCAGGGACAGTGGCTGATGCAACATCAGCCTTCCATGAAGCAGATCATGGCAATTATGGCCGAAAGAGATGCAGCCATCCAAGAAAGAAATCTGGCCATTTCTGAGAAAAAGGCAGCATATGCTGAGCGTGACATGGCATTTCTGCAGCGAGATGCTGCAATTGCAGAACGAAATAATGCAATTTTGGAACGAGATAATGCGATTGCAACTCTTCAGTATCGAGAAACCTCGTTAAGTAGTGGCAGTATGCCATCATGCCCTCCGGGATGCCAAATTTCACGTGGTGTCAAGCATATACATCATCCCCAGCAACAGGTACATCATATACCTAACATGGGTGATCCTTCTTACAACACAAGGGAGATGCACACAACTGATGTCCTCCCTGCAGCTCCCATCACTTCTGAGGCTGGGAAATCAAGGCGGGCCAAGCGGCCCAAGGAACCTAAGTCAACATCACCTAATAAGAAGACTACAAAAGCAGCAAAAAAAGTCAAAAAGGAGAGCGAAGACTTGAATAAGGTTATGTTTGGCAAGGCACATGAGTGGAAGAATGGTCAGGAAATGGTCAACGGAGGTGACGATCTTAACAAGCAGTTAGCAGTGTCTAAGGCTGATTGGAAAGGTCAGGACTTGGGATTGAACCAAGTGGCTTATGATGAGTCAACCATGCCAGCGCCAGTATGTTCTTGTACCGGTGTCCTTAAGCAGTGTTACAAATGGGGTAATGGAGGTTGGCAGTCCGCCTGTTGCACAACCACTCTGTCAATGTATCCACTTCCTGCAGTGCCGAACAAGAGGCATGCTCGGGTTGGAGGTCGGAAGATGAGTGGTAGCGCTTTCAACAAGCTGCTTAGTCGCCTTGCCGCAGAAGGTCACGATCTGTCAAACCCTGTTGACCTCAAAGACCATTGGGCCAAACACGGGACGAATCGATACATTACAATAAAGTAG 1014 0.4763 MDDAGHRENGRHKADQFKPAQGQWLMQHQPSMKQIMAIMAERDAAIQERNLAISEKKAAYAERDMAFLQRDAAIAERNNAILERDNAIATLQYRETSLSSGSMPSCPPGCQISRGVKHIHHPQQQVHHIPNMGDPSYNTREMHTTDVLPAAPITSEAGKSRRAKRPKEPKSTSPNKKTTKAAKKVKKESEDLNKVMFGKAHEWKNGQEMVNGGDDLNKQLAVSKADWKGQDLGLNQVAYDESTMPAPVCSCTGVLKQCYKWGNGGWQSACCTTTLSMYPLPAVPNKRHARVGGRKMSGSAFNKLLSRLAAEGHDLSNPVDLKDHWAKHGTNRYITIK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00309 337 Coils Coil 58 85 - -
Phco7g00309 337 MobiDBLite consensus disorder prediction 1 15 - -
Phco7g00309 337 MobiDBLite consensus disorder prediction 1 22 - -
Phco7g00309 337 MobiDBLite consensus disorder prediction 158 174 - -
Phco7g00309 337 PANTHER - 1 337 IPR010409 -
Phco7g00309 337 MobiDBLite consensus disorder prediction 146 189 - -
Phco7g00309 337 Pfam GAGA binding protein-like family 1 337 IPR010409 -
Phco7g00309 337 SMART GAGA_bind_2 1 337 IPR010409 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00309 Phco-Chr7 2173972 2175136 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Phco7g00309 GAGA_bind 6.6e-111 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00309 7 2173972 2175136 Phco7g00309 7 2173972 2175136 ECH