Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00304 ATGCGCCGATTGCAAAAATCCAAAAGAGTTTCATGGGCCTCCGATTTAGATCTTTGTCAGGTTAGGCTATTCTTATCAGAAGACTCCCCTTCACAGGTTGGGTTAAATTCTCAAGATCACCTCCAAGCTAAGGCATCATTGGTGTTGCCTCCAGGTGGACCAGGTTCTGATGACATTCTGCCTCCTGGATTTGAGGGAACTCATACTTCAAGTCAGTTTGAGATTAAGCCATCTCAAATACCAGTTATTAAGTGGATTACTCCTCCAAAGATTGTGCTAAATCTCACATGGCAAGTAGTGTGCGGGGAAGAAAGCAAGGAGGTAGAGGATCAACGTCAGAGGGAGATGAGAGTACTTGAAGCTATTTATCCTCGCATATCTTCCATTCCTCCAAACCCTTCCGTTTCAGTGGATGCGGAAGATTCAAATTACATAGATGGGCAACCTGCTTTGATACCAATAACGCCAATTGAAGATGAAGATGGAGCAGCAGAAGCATTATCGGATTCCTTGGAACCATTTGATGCTTCACAATCTCTTGAATTACCTCCTGGTATATTGAAGAATTCAAACTCTGTTACAAGTACGCAATTTGCTCGTGGTCTGACATCTGATGTAGCTGCTGCATCTGTTGCTTTAAGTAACATTGTGAAGAGCAACGAACATGGGAAATTGATCGACCATGACTTACTTAATAATATCCTCAACAATCCAGAAGTGATTGAGAAATTGGTTAGAGATTATGGAGCTACTAATAATTCGCAATTTGTACATAATGTGGGGTCGTCCTGTGCGGCCTTTTCAAATCCTCCTATTCCTATTAATCAAGGAGAAACCGCTACACCTTCATCGATTGCTTTTTCAGCCACTTCTTCCTATACACCACCATCTACTGGAGGTCAGGTGGCACCCGTTTCTACCCAATGGCCTCCTAGGCCTGCAGCCAGTTCAGCTATTGTTTCGTCTCCTGTTGAGGTCCCTGCTGCGAAAGATGTTAACTACTATAAGAGTTTAATTCAACAACATGGAGGAGAAAAACAAGAAACACTTCCATACTCCAGTAAACGTCAGATTCATCAGCCAGTAACAAGTTATGAGTCAACATACAATCAAAGAGCTAAAGTGTCAAAACCAAAGATAATGAAGCCTTGTATCTTTTTCAACAGTTCTAGAGGATGTCGGAATGGAGCCAACTGTGCCTACCAGCATGACGCATCATTTCAGCCGCGAGGTAATACCGTGCCAGGGATACAAGGTTCAAAAAGGATGAAAATGGATCATGAGATTAGCAGTTAA 1296 0.4252 MRRLQKSKRVSWASDLDLCQVRLFLSEDSPSQVGLNSQDHLQAKASLVLPPGGPGSDDILPPGFEGTHTSSQFEIKPSQIPVIKWITPPKIVLNLTWQVVCGEESKEVEDQRQREMRVLEAIYPRISSIPPNPSVSVDAEDSNYIDGQPALIPITPIEDEDGAAEALSDSLEPFDASQSLELPPGILKNSNSVTSTQFARGLTSDVAAASVALSNIVKSNEHGKLIDHDLLNNILNNPEVIEKLVRDYGATNNSQFVHNVGSSCAAFSNPPIPINQGETATPSSIAFSATSSYTPPSTGGQVAPVSTQWPPRPAASSAIVSSPVEVPAAKDVNYYKSLIQQHGGEKQETLPYSSKRQIHQPVTSYESTYNQRAKVSKPKIMKPCIFFNSSRGCRNGANCAYQHDASFQPRGNTVPGIQGSKRMKMDHEISS 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00304 431 ProSiteProfiles Zinc finger C3H1-type profile. 378 406 IPR000571 GO:0046872
Phco7g00304 431 MobiDBLite consensus disorder prediction 410 431 - -
Phco7g00304 431 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 280 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00304 Phco-Chr7 2138884 2143888 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Phco7g00304 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00304 7 2138884 2143888 Phco7g00304 7 2138884 2143888 ECH