Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g00261 | ATGGCCTCATCGCCCTGCGACTGTTGGACCCATCTTTCTCACTCACTCTCTTCTTCTTCTCCTTCTCCTTCTCCTTCCTCTTCCTCACTCCCCAAAACCCTTCTTCCTCCTCCTCCACCTCCTTCTTCTTCCTCTGAACATGTCTGGAACGACATCAAACTCCCCTCTCTCTCCAACTCCCCCGTTGACTCTTCTTCTCATTCTTCTCTCCTCTCTCTCTCTTCCTCTCGCAACCACCACTCTCTTCTCTCTGTCTCCAACGCTTCTTTCCCCTCCAACCAAACCACGCACCACCAAGATCAACGCCATACGCGCATCATGAAAAATCGAGAATCCGCGGTTCGCTCCAGAGCCAGAAAACAGGCTTATAGAACAGGGTTAGAAGCTGAAATTGCTCGTTTGACGGAAGAGAATTCGAGACTAAGAAAAGAATTGAAAAAGTTCCAGTGCTCTTTATCTTCATCAGAGAATACCACTCACAGAATCAGTGCTCCCTGCAGAACCTCATCATCTCCATTTTGA | 522 | 0.4847 | MASSPCDCWTHLSHSLSSSSPSPSPSSSSLPKTLLPPPPPPSSSSEHVWNDIKLPSLSNSPVDSSSHSSLLSLSSSRNHHSLLSVSNASFPSNQTTHHQDQRHTRIMKNRESAVRSRARKQAYRTGLEAEIARLTEENSRLRKELKKFQCSLSSSENTTHRISAPCRTSSSPF | 173 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g00261 | 173 | SUPERFAMILY | Leucine zipper domain | 102 | 149 | IPR046347 | GO:0003700|GO:0006355 | |
| Phco7g00261 | 173 | PANTHER | CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED | 58 | 150 | IPR043452 | GO:0003700|GO:0045893 | |
| Phco7g00261 | 173 | Coils | Coil | 124 | 151 | - | - | |
| Phco7g00261 | 173 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 99 | 149 | IPR004827 | GO:0003700|GO:0006355 | |
| Phco7g00261 | 173 | SMART | brlzneu | 97 | 161 | IPR004827 | GO:0003700|GO:0006355 | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 30 | 44 | - | - | |
| Phco7g00261 | 173 | Pfam | bZIP transcription factor | 99 | 148 | IPR004827 | GO:0003700|GO:0006355 | |
| Phco7g00261 | 173 | CDD | bZIP_plant_BZIP46 | 101 | 155 | - | - | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 98 | 121 | - | - | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 45 | 97 | - | - | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 152 | 173 | - | - | |
| Phco7g00261 | 173 | ProSitePatterns | Basic-leucine zipper (bZIP) domain signature. | 105 | 119 | IPR004827 | GO:0003700|GO:0006355 | |
| Phco7g00261 | 173 | MobiDBLite | consensus disorder prediction | 1 | 121 | - | - | |
| Phco7g00261 | 173 | Gene3D | - | 100 | 154 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g00261 | Phco-Chr7 | 1807592 | 1812020 | Transposed |
Transcription factors information