Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00252 ATGCTTGATTCGGTTCTTCTCGCGCTTTTCTTGCCGTGCCTCGGCATGAGCGCGGTTTTCATCGTCTACATGTGCCTTCTTTGGTACGCCACCACCAGACACCAGGCCCCCCGTAACGGGGTACCGGTGAAGCAGGTCGCTGACAAGGGTCTGTCTGCTTTGGAGTTGGAGAAGCTTCCCAGAATCACCGGCAAAGAACTGGTCTTGGGCACCGAATGCGCCGTCTGCCTGGACGAGATCGAGGGAGAGCAACCGGCCAGAGTGGTTCCCGGTTGCAACCACGGCTTCCATGTCCATTGCGCCGACACCTGGCTCTCCAACCACCCACTTTGCCCCGTTTGTAGAACCAAACTCGACCCCCAGATTTTCACTTCCCATAGCCCCTGCTGA 390 0.5795 MLDSVLLALFLPCLGMSAVFIVYMCLLWYATTRHQAPRNGVPVKQVADKGLSALELEKLPRITGKELVLGTECAVCLDEIEGEQPARVVPGCNHGFHVHCADTWLSNHPLCPVCRTKLDPQIFTSHSPC 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00252 129 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 5 119 - -
Phco7g00252 129 SMART ring_2 73 114 IPR001841 -
Phco7g00252 129 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 35 121 IPR013083 -
Phco7g00252 129 ProSiteProfiles Zinc finger RING-type profile. 73 115 IPR001841 -
Phco7g00252 129 Pfam Ring finger domain 72 115 IPR001841 -
Phco7g00252 129 SUPERFAMILY RING/U-box 72 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00252 Phco-Chr7 1765221 1765610 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00252 7 1765221 1765610 Phco7g00252 7 1765221 1765610 ECH
Phco2g00039 2 491266 491652 Phco7g00252 7 1765221 1765610 PCT