Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00241 ATGGTTAATTCTTGTGTACAATCCACGTCGAATGGGGTTAGCCAAGCTACCGTAAACATGGGAGACACAGAGAGTTGCAATAGAGGGATTTTAAATTCTGGATGGAATCATCGATGTCCAAAACAGAGACAGAAGGTTGGAGTTTACAACGAGGTTTTGTGTAGACTTAAGGAATTGAATGTCCCAGAGGCCTTGCTTCCTGGTTTTGAGGACGATCTTTGGACGCACTTCTATCGCCTCCCCGCCAGATATGCGTTGGACATGAATGTGGAGAGGGCAGAAGAAGTTTTGATGCATAAGAGGTTACTGGACATTGCAGGAGGCCCAACTACAGCAACCAAACCTGCAGTTGAAGTTCGTCTTGTACAGGTTCGTTCTACTTCTGCTTCTGCTAGTGGTTCTTCTAGTAAATCCCTTCTTTCAAATTCACAAAGTAAAGTTTGTCCTGAAGATTCTGGTATTCAAGGCAACACGAGCTTCCATCCTCCACCAGCCTTCGCTTCGTCATCTAATGTGGAACATGCACTTGGCCACGCCCAGTTCTTACCAGTTCGAGACAGGGATAACTATTTGAATTTTTATGCACATTATGCTCGGCCTATGCATGAAATCACAATTTCAACAAATGACAAGCCAAAACTTCTGAGTCAGTTGACTTCCCTACTTTCTGAGACTGGGTTGGACATTCTAGAAGCACATGCTTTTTCGACAATAGACGGTTATTCTTTGGATGTTTTTGTTGTTGGTGGTTGGCCAATTGAGGAGACGGAGAAGTTAAAACAAGAACTAGCAAAGAAAATTCAGAAACTCCAGCAACATCAATTGAAAGAAAATGGGAGTATTCCTACTAGTACTACTGCAAAGCAAGGGCAGACCGGGATGAACTTTATCTGGAGAATTGATGCCGGGTGTATGAGATATGAAAAGAAAATTGCATCAGGACCTTTCAGTGATTTGTATAAAGGTACATTCTGCAATCAAGATGTAGCTATCAAGGTTCTAAAGCACGATAATTTGAATGAAAATATACAAAGGGAGTTTGCTCAGGAAGTGTATATCCTAAGTAAAATTCAGCACAGAAATGTTGTTAAATTTGTTGGCGCTTGTACAAAACCCCCAAACCTGTACCTAGTCACAGAATACATGCCTGGTGGAAGTATGTTCGACTTTTTGCATAAACAGAAGACAGCCCTTACTCTTCCATCTTTACTGAAAGTGGCCATTGATGTTTCCGAAGGAATGAAATATCTGCATCAGAATAATATCATACATCGGGACCTTAAAGCGTCTAATCTTTTGATAGATGAGAATGGGGTAGTTAAGGTTGCTGATTTTGGTGTGGCTAGAGTGCACAATCAGTCTGGCATAATGACTGCAGAAACAGGAACTTATCGGTGGATGGCTCCAGAGGTTATTGAACATAGACCATATGATCACAAAGCCGATGTCTTTAGCTTTGCCATTGTTCTTTGGGAACTGCTCACAGGAAAGCTTCCTTATGAGCACTTGTCCCCATTGCAAGCAGCAGTAGGAGTGATCCAGAAGGGTTTAAGGCCTAAAATTCCAAGCCATACTCATTCAAAGTTAGTGGAATTGCTTCACTGGTGCTGGCACCACGATTCATCTCTCAGACCCAATTTCTCAGAAATTCTTGAATTTCTGCTACGTGTGACCAAGACGAAGCGTAAGGTTGTATTCTATGAAGTAAAAGAAAATCTAATGACTCAAAGAGAAGAAGTTGTGCTTGATTTCGAAGATAACAATGGCCGCAGCAACAGCAAAGAAGAAAATTCTGCATCAAAAGGTGTTGTCAACAGTCCAAGTGACAAGATTTATCAAGACTTGCAGGAAAAACGCAAAGGCAGTGAATCAACAAAAAAGAGGAAGCAGGATCAGCAAAGAAACCAAGAAAGTCACCTCCAAACTTCACATTCAGAAGAAAACGTTGCGAGGTCCACTTCGAACAATTCAACTCCACGATACTCGTGGAAATCATCAATAAGCAGAACAAAGTCTCGGCTGATAGACCCTCCAGAGGAATCATGCGCAAATTCAGAGTCCAGTGAACAAAAAGTGGCTGAAAATGATGACAGTGTTGAGGACATGCCAGAAATTTATAAGAAAACGAGGTTCAGTGTGTTCTCACTACTTCAGTGGCTATGTCTGACCTCAATAATCGTAGCCTTGCTTTCAAACCTTTGGATATCTTTCTTACGGAATGTCAAACTCTGTGGTCTTCCCCTGTGGGAATGGGAGACAATGATTTTAGTTCTAATTTGTGGGCGTTTGCTCTCAGGTTGGGTAATCAAACTAATCGTCTTCTTCGTGGAACGCAATTTTATACTAAGAAAACGAGTGCTGTATTTTGTGTACGGTTTGAAACACTCGGTGAAAAACTGTGTCTGGTTGGGCCTTGTTCTGCTGGTGTGGCATTTTATTTTGGTCAACGCGGTGAAGAGAAAAGTCAACGACAGGTTTTTGTCGTGTGTGACAAAGGTTGTGTTGTGTCTGTTCATCGGCACACTGATATGGCTTCTTAAAACTATCCTGGTGAAGGTCTTCGCCTTGCACTTCCACGTGAAAACGTTCTTCGAACGCATTCGGGAGGCTCTGTTCAGCCAATACGTGATCGAAACGCTGTCGTGTGATCGGTTGAGGGAAGAGGAAGAAGGTGAAGATAGATCCGTTGGGAGGGTGTTGTGTAATAAGAAGAAGCAAGATGAGGAAATGTCGATTGAGCAGTTGCATAGGTTGAATAAGCGAAATATATCAGCGTGGAATATGAAGAGAATGATTAACATCGTCATGCACGGGGCGTTTATTACTACATTGGACGAACGTATTTTGTGTTCAGATGTTGAGGATGAGCCTTTGCTGCAACTCAGAAGCGAATCCCAAGCAAAGATCGCGGCTCAGAAAATTTTTCATAACGTGGCGCAGCCAGGATCCCCATGTATTTTCTTGCAAGATGTGATGCAGTTTATGCGAAGAGACGAGGCTTTGAAGTCAATGGATCTGTTGGGAGCAGCGTGTACAGACCAGGGGATTAGCATGTCTTCTCTTAGAGAGTGGATGGTGAAAGCATTCAGGGAGAGAAGGGCACTAGCACTATCACTCAAAGACACAAAAACTGCTGTGGATGAGCTCCATAATATGTTGAACATGATTGTTGGTATTGTTATTTTAGTAGTATGGCTTGTCCTACTTGAAACTCCAATCCTTCACTTCCTTGTCTTCATGGGATCCCAGCTTCTGTTGGCAGTGTTTGTGTTTGGGAATTCTTGTAGAACTGTTTTTGAAGCTATCATCTTCTTATTTGTAATGCACCCATTTGATGTTGGAGATCGATGTGAAGTAGATGGAGTTCAGATGGTAGTGGAAGAGATGAATATACTCACAACAGTGTTTCTGAAGAGCGATAACCAAAAGCTTACGTACCCAAACAGTGTTTTGGCTACCAAGCCGATTAGTAATTATCAACGTAGTCCAGACATGGGAGAAGCAGTTGATTTCTGCATTCATATCTCCACTCCATTAGATAAAGTTGCAACTATGAAAAGAAGAATTATAGAGTATATTGAAAGGAAGAATGAACAGTGGCATGTGGCACCAATGGTGATAATGAAAGATGTGGAAGACTTGAACAAAGTGAACATGTCAGTGTGGCTTACACACAAAATGAATTATCAGGACATGAAAGAAAGATGGAAAAGGAGGACACAGTTGATTGAAGAGATGATGAAAGTGTTGAAGGAACTTGATGTTGAATACAGGCTTCTCCCTGTTGATGTGAATGTTAGAAATCAACCTCCTCTGCTTTCAAACAAGTTTCCATCCAATTGGAAAACTTGTGACACCTCTATGTCTTAG 3870 0.4181 MVNSCVQSTSNGVSQATVNMGDTESCNRGILNSGWNHRCPKQRQKVGVYNEVLCRLKELNVPEALLPGFEDDLWTHFYRLPARYALDMNVERAEEVLMHKRLLDIAGGPTTATKPAVEVRLVQVRSTSASASGSSSKSLLSNSQSKVCPEDSGIQGNTSFHPPPAFASSSNVEHALGHAQFLPVRDRDNYLNFYAHYARPMHEITISTNDKPKLLSQLTSLLSETGLDILEAHAFSTIDGYSLDVFVVGGWPIEETEKLKQELAKKIQKLQQHQLKENGSIPTSTTAKQGQTGMNFIWRIDAGCMRYEKKIASGPFSDLYKGTFCNQDVAIKVLKHDNLNENIQREFAQEVYILSKIQHRNVVKFVGACTKPPNLYLVTEYMPGGSMFDFLHKQKTALTLPSLLKVAIDVSEGMKYLHQNNIIHRDLKASNLLIDENGVVKVADFGVARVHNQSGIMTAETGTYRWMAPEVIEHRPYDHKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVIQKGLRPKIPSHTHSKLVELLHWCWHHDSSLRPNFSEILEFLLRVTKTKRKVVFYEVKENLMTQREEVVLDFEDNNGRSNSKEENSASKGVVNSPSDKIYQDLQEKRKGSESTKKRKQDQQRNQESHLQTSHSEENVARSTSNNSTPRYSWKSSISRTKSRLIDPPEESCANSESSEQKVAENDDSVEDMPEIYKKTRFSVFSLLQWLCLTSIIVALLSNLWISFLRNVKLCGLPLWEWETMILVLICGRLLSGWVIKLIVFFVERNFILRKRVLYFVYGLKHSVKNCVWLGLVLLVWHFILVNAVKRKVNDRFLSCVTKVVLCLFIGTLIWLLKTILVKVFALHFHVKTFFERIREALFSQYVIETLSCDRLREEEEGEDRSVGRVLCNKKKQDEEMSIEQLHRLNKRNISAWNMKRMINIVMHGAFITTLDERILCSDVEDEPLLQLRSESQAKIAAQKIFHNVAQPGSPCIFLQDVMQFMRRDEALKSMDLLGAACTDQGISMSSLREWMVKAFRERRALALSLKDTKTAVDELHNMLNMIVGIVILVVWLVLLETPILHFLVFMGSQLLLAVFVFGNSCRTVFEAIIFLFVMHPFDVGDRCEVDGVQMVVEEMNILTTVFLKSDNQKLTYPNSVLATKPISNYQRSPDMGEAVDFCIHISTPLDKVATMKRRIIEYIERKNEQWHVAPMVIMKDVEDLNKVNMSVWLTHKMNYQDMKERWKRRTQLIEEMMKVLKELDVEYRLLPVDVNVRNQPPLLSNKFPSNWKTCDTSMS 1289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00241 1289 MobiDBLite consensus disorder prediction 636 672 - -
Phco7g00241 1289 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 577 1281 IPR016688 -
Phco7g00241 1289 Coils Coil 612 632 - -
Phco7g00241 1289 MobiDBLite consensus disorder prediction 131 161 - -
Phco7g00241 1289 CDD STKc_MAP3K-like 311 554 - -
Phco7g00241 1289 MobiDBLite consensus disorder prediction 584 698 - -
Phco7g00241 1289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Phco7g00241 1289 SMART serkin_6 305 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00241 1289 SUPERFAMILY Protein kinase-like (PK-like) 287 554 IPR011009 -
Phco7g00241 1289 ProSiteProfiles Protein kinase domain profile. 305 554 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00241 1289 Pfam Mechanosensitive ion channel 1051 1256 IPR006685 GO:0016020|GO:0055085
Phco7g00241 1289 FunFam Kinase suppressor of Ras 1 294 382 - -
Phco7g00241 1289 Gene3D Phosphorylase Kinase; domain 1 299 382 - -
Phco7g00241 1289 Gene3D - 1110 1159 IPR023408 -
Phco7g00241 1289 SUPERFAMILY ACT-like 201 271 IPR045865 -
Phco7g00241 1289 Pfam Protein tyrosine and serine/threonine kinase 307 554 IPR001245 GO:0004672|GO:0006468
Phco7g00241 1289 MobiDBLite consensus disorder prediction 593 611 - -
Phco7g00241 1289 MobiDBLite consensus disorder prediction 612 635 - -
Phco7g00241 1289 ProSiteProfiles ACT domain profile. 203 282 IPR002912 -
Phco7g00241 1289 Coils Coil 253 276 - -
Phco7g00241 1289 FunFam Predicted mechanosensitive ion channel 1110 1159 - -
Phco7g00241 1289 Gene3D Transferase(Phosphotransferase) domain 1 383 672 - -
Phco7g00241 1289 SUPERFAMILY Sm-like ribonucleoproteins 1100 1159 IPR010920 -
Phco7g00241 1289 PRINTS Tyrosine kinase catalytic domain signature 416 434 IPR001245 GO:0004672|GO:0006468
Phco7g00241 1289 PRINTS Tyrosine kinase catalytic domain signature 525 547 IPR001245 GO:0004672|GO:0006468
Phco7g00241 1289 PRINTS Tyrosine kinase catalytic domain signature 481 503 IPR001245 GO:0004672|GO:0006468
Phco7g00241 1289 PRINTS Tyrosine kinase catalytic domain signature 379 392 IPR001245 GO:0004672|GO:0006468
Phco7g00241 1289 PRINTS Tyrosine kinase catalytic domain signature 462 472 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00241 Phco-Chr7 1639509 1651912 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Phco7g00241 PK_Tyr_Ser-Thr 3.7e-72 CL0016