Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00211 ATGTTGAGTGACGCGGACGCCGACTTTGATGGGCTTGCCCACTTGAACTGCAAACTCTTCTTATTGTATCGGTCCCATATGCTCTTTACCCATCATCACTTTGTCTCACTCATGGGAAACTGTTTTGGAAAACCAGATGATGGTAAGAAAACTGAGTACAAGATTCCCACCATCAATAAGCTTCCCCAAGGGAGATCAGAGAAGAAGGGAACGGCGGAAGGAAGAAATGAAGAAGAGGTGAGGAAACTTATAAATTACACATTGGATGAGTTGAAAAGTACGACAAGAAACTTCAGACCAGACACGGTCCTAGGTGAAGGTGGTTTTGGACGTGTTTTCAAAGGGTGGATTGATAAGAACACGTTCAAACCCTCGAGAGTTGGTGTTGGAATTCCCGTTGCGGTGAAGAAATCTAACCCCGATAGCCTTCAGGGTCTACAAGAATGGAAGAGTGAAGTGCAATTTTTGGGAAAGCTCTCTCATCCAAACCTAGTTAAACTAATTGGCTACTGCTGGGAGGATAATCAATTCCTGCTGGTATACGAATACATGCAAAAGGGAAGTCTTGAAAGCCACCTGTTCAGAAGAGGTCCAGAACCACTTTCATGGGACATAAGGCTGAAGATAGCAATAGGAGCAGCCAGAGGACTAGCTTTCTTGCATACATCAGAGAAGTCTGTCATCTATCGAGACTTCAAGTCCTCCAACATTTTGCTTGATGGGGATTTCAATTCCAAGCTATCAGATTTTGGACTGGCAAAGCTTGGTCCCGTCAACGGTAGATCCCACGTAACCACGCGGGTCATGGGCACCTATGGTTACGCAGCACCTGAATACGTCGCCACAGGGCACCTGTATGTTAAAAGCGATGTGTACGGTTTCGGCGTTGTTCTGCTTGAAATACTAACAGGCAGAGCAGCTCTGGACACAAGCCAGCCCGCGGATAAGCAGAATTTGGTGCTGTGCAGTATGTCATCTCTGGATGACAAAAAGAGACTGAAAAAGATAATGGACCAAAAAATGGAGGACCAATATTCACTTAGAGCTGCATCTCACGTAGCCCAACTTATCCTCAAATGCTTAGAATCTGACCACAGAAAACGACCCTCCATGGTGGAGGTTTTGGCAGCCTTAGAAAAAGCACAAACTATGAAGTACAAACCCAAAGGGAATAAAGCCTCTGCAATTCGTCAAACATCAGAGGTGCATCACTCAAATAACCCACGTCGGTCACCACCACCGCTTCACTACCACAACGATTAA 1263 0.4553 MLSDADADFDGLAHLNCKLFLLYRSHMLFTHHHFVSLMGNCFGKPDDGKKTEYKIPTINKLPQGRSEKKGTAEGRNEEEVRKLINYTLDELKSTTRNFRPDTVLGEGGFGRVFKGWIDKNTFKPSRVGVGIPVAVKKSNPDSLQGLQEWKSEVQFLGKLSHPNLVKLIGYCWEDNQFLLVYEYMQKGSLESHLFRRGPEPLSWDIRLKIAIGAARGLAFLHTSEKSVIYRDFKSSNILLDGDFNSKLSDFGLAKLGPVNGRSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLEILTGRAALDTSQPADKQNLVLCSMSSLDDKKRLKKIMDQKMEDQYSLRAASHVAQLILKCLESDHRKRPSMVEVLAALEKAQTMKYKPKGNKASAIRQTSEVHHSNNPRRSPPPLHYHND 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00211 420 PANTHER OS01G0588500 PROTEIN-RELATED 81 382 - -
Phco7g00211 420 ProSitePatterns Protein kinases ATP-binding region signature. 104 137 IPR017441 GO:0005524
Phco7g00211 420 Pfam Protein tyrosine and serine/threonine kinase 102 377 IPR001245 GO:0004672|GO:0006468
Phco7g00211 420 FunFam PTI1-like tyrosine-protein kinase 3 184 390 - -
Phco7g00211 420 FunFam Serine/threonine-protein kinase BIK1 65 183 - -
Phco7g00211 420 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Phco7g00211 420 ProSiteProfiles Protein kinase domain profile. 98 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00211 420 Gene3D Phosphorylase Kinase; domain 1 69 183 - -
Phco7g00211 420 MobiDBLite consensus disorder prediction 393 407 - -
Phco7g00211 420 MobiDBLite consensus disorder prediction 383 420 - -
Phco7g00211 420 SUPERFAMILY Protein kinase-like (PK-like) 80 378 IPR011009 -
Phco7g00211 420 Gene3D Transferase(Phosphotransferase) domain 1 184 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00211 Phco-Chr7 1380566 1384274 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Phco7g00211 PK_Tyr_Ser-Thr 2.4e-46 CL0016