Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00210 ATGAGTTGTTTTTCCTGCTTTGTTTCTCGCCGGAAAGATGTCAGAAGGGTTGAAATTGACAATGGCGCTCGATCTGCTGCTACTGCTGCTCCCTCAGAGGGGGAAAGGAAGAGAGAATCCTCGGAGGCAAAGGGGAAGAGTGTTAGTAGTAGTAAAGGAAGTACTGCAGCGGCTAGTTTTGGTTTTCGCGAACTTGCTGCGGCGACGAGGGGTTTCAAGGAAGTGAATTTAATCGGGGAAGGTGGTTTTGGAAGGGTTTACAAGGGTCGACTTTCAACGGGCGAGCTCGTTGCAGTGAAACAATTGAGTCATGATGGTCGGCAAGGTTTTCAGGAATTTGTGACGGAGGTTCTTATGTTGAGCCTGCTGCACCATTCTAATCTTGTGAAGTTAATTGGCTACTGCACTGATGGAGATCAAAGGCTTTTGGTTTATGAGTACATGCCCATGGGTTCACTGGAGGATCATCTTTTTGATCCAACCCAAGACAAAGAACCCTTAAGTTGGAGTTCTCGAATGAAGATTGCTGTTGGAGCAGCTCGTGGCCTCGAGTATCTCCATTGTAAAGCAGATCCACCTGTTATCTACAGAGACTTGAAATCTGCTAACATCTTGTTAGATAATGAATTCAACCCAAAACTGTCAGATTTTGGGCTTGCTAAACTTGGACCTGTTGGAGACAATACCCATGTTTCAACCAGAGTAATGGGAACATATGGCTACTGTGCGCCTGAGTATGCCATGAGTGGCAAATTAACTCTTAAATCTGATATATACAGCTTTGGTGTGGTTTTGTTGGAGTTAATCACTGGACGTAGAGCAATAGATGCCAGTAGAAAACCAGGAGAGCAAAACTTGGTTTCATGGTCTCGCCCATACTTTAGTGATCGGAGAAAGTTTGTACATATGGTTGACCCTCTTTTACAAGGCAACTTCCCCTTGCGCTGTTTGCATCAGGCAATTGCTATAACTGCTATGTGTCTCCAGGAGCAACCAAAATTCCGTCCACTTATTGGTGATATTGTTGTCGCACTGGAATACCTAGCTTCTCAGAGTATTGCTGAAGTGCATAGACATGGTGGGCGCAGCTCACCGCAACAACCATCTTCTGAAATCGACAGAAATTAA 1128 0.4495 MSCFSCFVSRRKDVRRVEIDNGARSAATAAPSEGERKRESSEAKGKSVSSSKGSTAAASFGFRELAAATRGFKEVNLIGEGGFGRVYKGRLSTGELVAVKQLSHDGRQGFQEFVTEVLMLSLLHHSNLVKLIGYCTDGDQRLLVYEYMPMGSLEDHLFDPTQDKEPLSWSSRMKIAVGAARGLEYLHCKADPPVIYRDLKSANILLDNEFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRRAIDASRKPGEQNLVSWSRPYFSDRRKFVHMVDPLLQGNFPLRCLHQAIAITAMCLQEQPKFRPLIGDIVVALEYLASQSIAEVHRHGGRSSPQQPSSEIDRN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00210 375 SUPERFAMILY Protein kinase-like (PK-like) 53 346 IPR011009 -
Phco7g00210 375 FunFam probable serine/threonine-protein kinase RLCKVII 44 147 - -
Phco7g00210 375 SMART serkin_6 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00210 375 PANTHER OS07G0668900 PROTEIN 23 354 - -
Phco7g00210 375 ProSiteProfiles Protein kinase domain profile. 72 348 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00210 375 Gene3D Transferase(Phosphotransferase) domain 1 148 363 - -
Phco7g00210 375 ProSitePatterns Serine/Threonine protein kinases active-site signature. 194 206 IPR008271 GO:0004672|GO:0006468
Phco7g00210 375 MobiDBLite consensus disorder prediction 31 45 - -
Phco7g00210 375 Gene3D Phosphorylase Kinase; domain 1 32 147 - -
Phco7g00210 375 Pfam Protein kinase domain 72 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00210 375 MobiDBLite consensus disorder prediction 19 53 - -
Phco7g00210 375 CDD STKc_IRAK 78 346 - -
Phco7g00210 375 FunFam Serine/threonine-protein kinase PBS1 148 362 - -
Phco7g00210 375 ProSitePatterns Protein kinases ATP-binding region signature. 78 100 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00210 Phco-Chr7 1367724 1371277 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Phco7g00210 Pkinase 5.1e-47 CL0016