Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00205 ATGGAGGCAGAACATCATCAAGAAGCCTCAAACGCTATTGGAAGCCTTGGAAGCCTTTACGTTAAAGTGATGACCGACGAACAAATGGAACTTCTGAGGCAGCAGATATCTGTCTACGCCACCATCTGCGAGCAGCTTGTTGAGATGCACAAAGCCGTGACCACCCAACAGGACCTCGCAGGGCTGAGGCTGGGTAATTTGTACTGTGATTCGTTGATGGCGTGTTCTGGACACAAGATAACTGCGAGGCAGCGTTGGACCCCAACGCCTCTGCAGCTTCAAATTCTGGAGCGTATTTTTGATGAGGGGAATGGCACTCCAAGTAAGCAGAAGATCAAGGAGATCACCATTGAACTGGGCCAACATGGCCAGATATCAGAGACAAATGTTTATAACTGGTTCCAGAACAGAAGGGCTCGATCAAAGAGGAAGCAACTCGCTCCCGCATCGAATGTTGAGCCAGAAGCCGAGACAGAAGTTGAGTCTCCACGAGAGAAAAAGATACGCGCCGAAAACGTTCAGGTTATTCAACCCTTTGAGAATTCATCATCACCTCATAGGATCAAGGATATGTACATCCACAGTCCTGACTTAGGATTTGAGCAACTGATGAGTAAAATAGAAGTTGCAGGATGTTACAGCTCTTATTTTCTTTGA 657 0.4703 MEAEHHQEASNAIGSLGSLYVKVMTDEQMELLRQQISVYATICEQLVEMHKAVTTQQDLAGLRLGNLYCDSLMACSGHKITARQRWTPTPLQLQILERIFDEGNGTPSKQKIKEITIELGQHGQISETNVYNWFQNRRARSKRKQLAPASNVEPEAETEVESPREKKIRAENVQVIQPFENSSSPHRIKDMYIHSPDLGFEQLMSKIEVAGCYSSYFL 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00205 218 Pfam Homeodomain 83 143 IPR001356 GO:0003677
Phco7g00205 218 SUPERFAMILY Homeodomain-like 82 145 IPR009057 -
Phco7g00205 218 ProSiteProfiles 'Homeobox' domain profile. 79 144 IPR001356 GO:0003677
Phco7g00205 218 CDD homeodomain 83 145 IPR001356 GO:0003677
Phco7g00205 218 Gene3D - 84 148 - -
Phco7g00205 218 PANTHER WUSCHEL-RELATED HOMEOBOX 13 7 201 IPR044559 GO:0003700
Phco7g00205 218 MobiDBLite consensus disorder prediction 142 165 - -
Phco7g00205 218 SMART HOX_1 81 148 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00205 Phco-Chr7 1327556 1328587 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco7g00205 Homeodomain 5.2e-18 CL0123