Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00187 ATGCTGGCAATGGAAGACCTACTGTGTGAACTTAGTGATCATGAAAAGAGAAACGAGCAAGGTCTGCCACCGGGTTTCAGGTTTCACCCCACCGATGAAGAACTTATAACCTTTTACCTGGCTTCAAAAGTCTTTAATGGGAGCTTCACTAGTGTCAAGTTTGCTGAGGTTGATCTCAATAGATGTGAGCCATGGGAACTTCCAGATGTGGCAAAGATGGGGGAGAGAGAGTGGTATCTGTTCAGCTTGAGAGACAGAAAATATCCAACTGGACTTAGAACAAACAGGGCCACCGGAGCTGGGTACTGGAAAGCCACTGGGAAGGACAAGGAAGTGTTCAGTGCATCAAGTGGAACCCTACTTGGGATGAAGAAGACCCTTGTTTTCTACAAAGGAAGGGCCCCTCGTGGTGAAAAGACCAAATGGGTCATGCATGAGTACCGTTTGGACGGTGACTTTTCCCTTCCCCACTCTCACCCTCATCACATTTCTAAGGAGGAGTGGGTGATATGCAGGATATTTCATAAATCCGGGGAAAAGAGGACTCCACTGCTCCAAGTCCAAGGACATTCAGATGCTTCTTCGTCCCCAACAAAAAATTCTTTACCTCCTTTACTTGCAAGCCCAACTTCCTTTACATTGGAACTAGAATGTCAATCCCAACAAAGCCCGGTTCTCATTCACCACCACCAAGACCAACACCCTTATCTTTTCCCATTGCATGCATCACCACAACTCACTAACGCCAGAAACCATCCTTCATTTTCTGACCTATTCTTTAAGCCCCTGCACAACTCACAACAAAATTGCATCTTCAAGGCCAAGGAAAAAACAGTTCCAAAAGTAGTCAAAACGGAGGAGGCCACAGCATTCTATCAGTACCATTTACTAGGTGACGCCAATAACTTGCGGTTGAACCAAAATCCGAGCAATTTCCCAAACCCTTTCCCTGATGTTGAGGTGGATGCTGGGCTGATGGCATTCTCAGGAGGTCCAAATGCTGAAGTTAGGGACATGTCCACTTCAACTACCTTTAATAGGGTAGGGTTGCAGCAGGTGATAGATGCTGCTCATATCGGCATAGATTCTTGGCCTCTGGCCCAGCATGTTTAA 1113 0.4636 MLAMEDLLCELSDHEKRNEQGLPPGFRFHPTDEELITFYLASKVFNGSFTSVKFAEVDLNRCEPWELPDVAKMGEREWYLFSLRDRKYPTGLRTNRATGAGYWKATGKDKEVFSASSGTLLGMKKTLVFYKGRAPRGEKTKWVMHEYRLDGDFSLPHSHPHHISKEEWVICRIFHKSGEKRTPLLQVQGHSDASSSPTKNSLPPLLASPTSFTLELECQSQQSPVLIHHHQDQHPYLFPLHASPQLTNARNHPSFSDLFFKPLHNSQQNCIFKAKEKTVPKVVKTEEATAFYQYHLLGDANNLRLNQNPSNFPNPFPDVEVDAGLMAFSGGPNAEVRDMSTSTTFNRVGLQQVIDAAHIGIDSWPLAQHV 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00187 370 Gene3D NAC domain 31 180 IPR036093 GO:0003677|GO:0006355
Phco7g00187 370 ProSiteProfiles NAC domain profile. 22 176 IPR003441 GO:0003677|GO:0006355
Phco7g00187 370 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 19 245 - -
Phco7g00187 370 SUPERFAMILY NAC domain 17 176 IPR036093 GO:0003677|GO:0006355
Phco7g00187 370 FunFam NAC domain-containing protein 100-like 31 180 - -
Phco7g00187 370 Pfam No apical meristem (NAM) protein 23 149 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00187 Phco-Chr7 1217014 1219533 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Phco7g00187 NAM 7.6e-38 No_clan