Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00166 ATGGCTTCTGATTCCAATTCCAATTCCAATTCCAATTCCGATTCCAATTCCAATTCCAATTCCAATTCCGATTCCAATTCCAATTCCAATTCCAATTCCGATTCCAATTCCAATTCCAATTCCCCATCTCCACCCAATTCATCTTCCTCCCAATCTCCACCACCGTCACAGAACAATTCACCGCCTCCTCCCTCGTCAAACGATGAGAAATCTCCGCCGCCGCCGCCGCCGCCGCCACCACCACCTCCTGATAAAGAATCAAGTGGACACCGGTCACCCCCGCCCCCACGTTCGGGGCACGAGTTTTCTCCTCCTCCACCTTCAAAGAACCGGTCGTCTCTTCCCAAGTCAACGTCTTCGAGCTCATCAGAAGATAGTGGAAGCCATTCATTGAGCACACCAGTTATAATAGTAATTGCAGCTGCAGCTGGGATTTTTCTCCTTCTTCTTCTCATAGCCATCGTTGCGTGTTCAAAAAGAAAGAAGAGATCTCAGTCTTCCATTAATTACTACGGCAATAAACCTAATGATGGGTTTTACAAAAATGAGTATGGGTACAAGAACAATAACGTTGAGCACGTAATGAATATTCCTCCACATCCACATCCACATCCAGGAGCAGCTTGGTCAACACCCCAACATGTTAGTACTGTATCGAGCAGTTCCGGTTTCTCTGGGCCCCAAGGTCCCATTTTGCCACCTCCACACCCCACGGTGGCCCTCGGATTCAACCAAAGCTCCTTCACTTATGCCGAGCTCTCGGCTGCCACTGATGGCTTTAGCCAGCGCAACCTGCTGGGCCAGGGTGGTTTTGGATACGTCCACAAAGGTGTTCTACCCAATGGCAAGGAAATTGCAGTGAAGAGCCTGAAATCCACTGGGTGCCAAGGGGACAGAGAATTCCAAGCTGAGGTTGAAATCATTAGCCGTGTCCATCATCGCCATCTGGTCTCACTTGTTGGTTATTGCATGTCAGAAACCCAAAACCTCCTCGTTTATGAGTTTGTGCCTAACAATACCTTCGAATACCACCTTCATGGAAAGGATCGACCTGTGATGGATTGGGATACCAGGCTCAAAATTGCGATTGGATCGGCCAAAGGACTTGCTTATTTACATGAGGATTGTCACCCTCGTATTATTCACCGAGACATAAAGGGTGCAAACATTCTTCTTGAAAACAACTTTGAAGCCAAAGTGGCAGATTTTGGGTTGGCAAAGTTTAATCAAGACGCTAACACTCACGTTTCTACTCGTGTAATGGGAACATTTGGGTATTTGGCTCCAGAGTATGCATCAACGGGTAAGCTAACTGACAAATCCGATGTGTTCTCGTTCGGTATTATGCTTTTGGAGCTCATAACAGGTCGACCCCCTGTGGACAACACTGGGGAAATGGAAGATAGTTTGGCCGACTGGGCTAGACCACTTTGTACAAAGGTAATGGAGGATGGAAGTTTTGAAGGGCTTGTGGATCCACGTTTAGAGGGGAATTATGACAAGCAGCAAATGACTTCTATGGTGGCTTGTGCTGCATTTAGCATAAGGCACTCAGCAAAGAGGCGTCCAAAAATGAGTCAGGTTGTGAGAGTACTGGAGGGTGATGTGTCAGTAGAAGTGCTTAGTCAGGAGGGAGTGAAACCTGGACAAAGTGGAATGTTCAGTTCAAGTGGGGTGTATGGTGCGAAGACATACGGTGCTGACATGGTGAATTTCAGTAAACTATCATTAGATAGTAGCAGTGAGTTTGGTGCAACCAGTGAATATGGCCTTAAACCTCCCATCCCAAGAAGTGAACAATCATCTGCGGAATATGCCAATGCAAGGAGGGTAGGAGCTCGAATGCACACTCCTTAA 1857 0.4712 MASDSNSNSNSNSDSNSNSNSNSDSNSNSNSNSDSNSNSNSPSPPNSSSSQSPPPSQNNSPPPPSSNDEKSPPPPPPPPPPPPDKESSGHRSPPPPRSGHEFSPPPPSKNRSSLPKSTSSSSSEDSGSHSLSTPVIIVIAAAAGIFLLLLLIAIVACSKRKKRSQSSINYYGNKPNDGFYKNEYGYKNNNVEHVMNIPPHPHPHPGAAWSTPQHVSTVSSSSGFSGPQGPILPPPHPTVALGFNQSSFTYAELSAATDGFSQRNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGCQGDREFQAEVEIISRVHHRHLVSLVGYCMSETQNLLVYEFVPNNTFEYHLHGKDRPVMDWDTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVADFGLAKFNQDANTHVSTRVMGTFGYLAPEYASTGKLTDKSDVFSFGIMLLELITGRPPVDNTGEMEDSLADWARPLCTKVMEDGSFEGLVDPRLEGNYDKQQMTSMVACAAFSIRHSAKRRPKMSQVVRVLEGDVSVEVLSQEGVKPGQSGMFSSSGVYGAKTYGADMVNFSKLSLDSSSEFGATSEYGLKPPIPRSEQSSAEYANARRVGARMHTP 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00166 618 FunFam proline-rich receptor-like protein kinase PERK1 238 335 - -
Phco7g00166 618 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 142 560 IPR047117 -
Phco7g00166 618 MobiDBLite consensus disorder prediction 97 111 - -
Phco7g00166 618 SUPERFAMILY Formin homology 2 domain (FH2 domain) 73 215 - -
Phco7g00166 618 ProSitePatterns Protein kinases ATP-binding region signature. 266 288 IPR017441 GO:0005524
Phco7g00166 618 MobiDBLite consensus disorder prediction 112 130 - -
Phco7g00166 618 FunFam Proline-rich receptor-like protein kinase PERK1 336 543 - -
Phco7g00166 618 MobiDBLite consensus disorder prediction 1 46 - -
Phco7g00166 618 MobiDBLite consensus disorder prediction 583 618 - -
Phco7g00166 618 MobiDBLite consensus disorder prediction 47 89 - -
Phco7g00166 618 SUPERFAMILY Protein kinase-like (PK-like) 240 532 IPR011009 -
Phco7g00166 618 SMART serkin_6 260 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00166 618 Gene3D Transferase(Phosphotransferase) domain 1 336 544 - -
Phco7g00166 618 ProSiteProfiles Protein kinase domain profile. 260 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00166 618 ProSitePatterns Serine/Threonine protein kinases active-site signature. 380 392 IPR008271 GO:0004672|GO:0006468
Phco7g00166 618 Gene3D Phosphorylase Kinase; domain 1 237 335 - -
Phco7g00166 618 MobiDBLite consensus disorder prediction 1 130 - -
Phco7g00166 618 Pfam Protein tyrosine and serine/threonine kinase 263 465 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00166 Phco-Chr7 1077839 1081156 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Phco7g00166 PK_Tyr_Ser-Thr 9.3e-45 CL0016