Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00162 ATGGCGGCATCCGCCACTGTCTCCGGCGGTGCACTGCCGGATCTAACTCATCGAACCTCCTTTCTCGGACTCAAACTCTACACCCTGCTCCTCATTTTAGTTTTGATGGTGGTCACAACGGTGCTCCTGATCCTCCTCTGCGTCCGCCGGCGCTGGAAGAAGAGGAAAATGCGAGTGAAGCACAGCTCCGGCGCGATCCCGCTGGTGTCGAAGGAGATCGTGGAGGTGAATACTCTGGAGCTGAAAATCGAAGAGGTGGACGAGGAAGATCCGAAGAAGAAGGAGATGAAGCTTGAAGAGAGTCCGTCGGTGGAGTCACCGAATATAGGGTGGGGACGCTGGTATAGCCTCAGAGAGCTTGAGACTGCGACGCAAGGGTTCGCCGAAGGGAATGTGATCGGAGAAGGAGGGTATGGGATTGTGTATAGAGGAAATTTGCTCGACGGTTCTGTCGTCGCCGTCAAAAATCTTCTCAACAACAAGGGGCAGGCAGAGAAAGAGTTTAAGGTGGAGGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTGGGGCTAGTTGGATATTGTGCAGAAGGTGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAACATTGGAACAGTGGCTGCATGGTGAAGTAGGACCTGTTAGCCCCCTGACATGGGATGTGCGAATGAAGATTGCTGTTGGGACTGCGAAAGGGCTAGCGTACTTGCACGAAGGATTAGAACCCAAAGTTGTCCATCGAGATGTAAAATCCAGTAACATTCTTTTGGACAAAAGGTGGAATGCTAAAGTATCAGACTTTGGACTAGCCAAGCTCTTAGGGCCTGAGAAAAGCTATGTGACAACACGTGTAATGGGGACATTTGGATATGTGTCACCTGAGTATGCAAGCACGGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTTATGGAGCTAATTACGGGAAGGAGTCCCATCGATTATTCTAGACCACCTGGGGAGATGAACTTGGTTGATTGGTTTAAAGGAATGGTTGCAAATCGTCGTGGTGATGAACTAGTTGATCCTTTAATAGATATTCAACCCTCCCAAAGATCTTTGAAACGAGCTTTGCTTGTATGTCTGCGCTGTATAGATTTGGATGTTAGTAAGCGACCAAAGATGGGCCAAATTGTTCACATGCTTGAGGCTGACGATTTTCCCTTTCGTTCTGAACATCGAACAAATAGAGAGAAAGATCCTGTTATTTCTAAAGCAGCTGCTTCCAGCAAGATTCCATATCCAACAAGGCATGTAGAGCCCATAGATAAATCAAGCTGGAGATGA 1335 0.4742 MAASATVSGGALPDLTHRTSFLGLKLYTLLLILVLMVVTTVLLILLCVRRRWKKRKMRVKHSSGAIPLVSKEIVEVNTLELKIEEVDEEDPKKKEMKLEESPSVESPNIGWGRWYSLRELETATQGFAEGNVIGEGGYGIVYRGNLLDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCAEGAQRMLVYEYVDNGTLEQWLHGEVGPVSPLTWDVRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKRWNAKVSDFGLAKLLGPEKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELITGRSPIDYSRPPGEMNLVDWFKGMVANRRGDELVDPLIDIQPSQRSLKRALLVCLRCIDLDVSKRPKMGQIVHMLEADDFPFRSEHRTNREKDPVISKAAASSKIPYPTRHVEPIDKSSWR 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00162 444 CDD STKc_IRAK 133 399 - -
Phco7g00162 444 ProSiteProfiles Protein kinase domain profile. 127 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00162 444 FunFam Putative receptor-like serine/threonine-protein kinase 203 413 - -
Phco7g00162 444 MobiDBLite consensus disorder prediction 407 444 - -
Phco7g00162 444 PANTHER OS01G0323000 PROTEIN 102 421 - -
Phco7g00162 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Phco7g00162 444 Gene3D Phosphorylase Kinase; domain 1 86 202 - -
Phco7g00162 444 Coils Coil 69 89 - -
Phco7g00162 444 SUPERFAMILY Protein kinase-like (PK-like) 105 399 IPR011009 -
Phco7g00162 444 Pfam Protein kinase domain 129 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00162 444 FunFam Probable serine/threonine-protein kinase At1g01540 107 202 - -
Phco7g00162 444 SMART serkin_6 127 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco7g00162 444 ProSitePatterns Protein kinases ATP-binding region signature. 133 155 IPR017441 GO:0005524
Phco7g00162 444 Gene3D Transferase(Phosphotransferase) domain 1 203 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00162 Phco-Chr7 1053819 1056883 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Phco7g00162 Pkinase 5e-45 CL0016