Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00158 ATGTTGCACTGTGCGAACGCGTCGGGGAATCTGGCTGGGGACATGACAGTGTTGGAAAGACAGAGGGCGAGGATGAAGTGGCAAGAAGAGCAAGGGTACTTCTCTGGGTTCAACGCTGTTTTCCCTTCTTCTTCTTCTTCTTCTTCTTCTCTTCATGTTCAAGATTCCTTGATGCTGGCTGCTGATTCTGGTTGTGCGCTTGGTGAAGTGGTGGCTCAGGCTCAGGCTCAGGCTCGCTCCATGAATAAGCCGTCTCTTGCTGGGTTTGATTCAAGTTCTTCAATTTCAAGGACTTTTAGTTGTCCGCCTGCTCTGGTGGAGCCCGAGCCCAGGCCCACTGACTCCTCAATTGGGAAAGAGAGTTTGAAGAAAAGGAAGCCTGACAAGCTTCACAATACTAAGTTTGTTACAGAAAATGATATGAAAGACAAGAGGATCAAAGTGGGTACCGACGATGAACAATCCAAAATCACAGGGAGCCCCAAGAGTAACACGAAAACTAATTGCAACCAAAGAGAGACTTGTGCAGACACTTCAAATTCAAAGCAAAATTCCAAACCCTCCGAGGTTCAAAATCACAAGCCTGATTACATTCACGTTCGAGCACGTCGTGGCCAAGCCACCGATAGCCATAGCTTAGCTGAAAGAGTCAGAAGGGAAAAAATTAGTGAGAGAATGAAGTATTTGCAAGATTTAGTACCTGGTTGCAACAAAATCACGGGAAAAGCTGGAATGCTTGATGAAATCATCAACTACGTTCAATCTCTTCAACGACAGGTTGAGTTTCTGTCAATGAAATTAGCTGCTGTGAACCCAAGGCTTGACTTCAGCGTTGATGATCTATTTGAAAAAGAGGTGTTTCCTGCTTCTGCTGCCAATTTTCCAAACATTGGAATATCATCAGATTTGACTAACTCTGCCTATCTTCAATTTAATTCACCACAACAAATGGTTTCGTATGGAGGAGGATTAGACACGGGGATTAACCCTCCCTATACGGGTCTAAAAAGGAGTACAAGTGCCCATGTATCAATGCCTGAAACATATCTTCACTCCTCCTGTTTCACACAAATGCTGCCCTCCTCAGCATGGGAAGGTGATTTCCAAAACCTTTGCAATTTGGATTTTGATCAAGTGCGAGCCACATCTTTCCCTTCTCATCTGTCCTCAGGACTGGTTGAAGCTGGCAATCATCTAAAGATGGAGATGTAG 1212 0.4472 MLHCANASGNLAGDMTVLERQRARMKWQEEQGYFSGFNAVFPSSSSSSSSLHVQDSLMLAADSGCALGEVVAQAQAQARSMNKPSLAGFDSSSSISRTFSCPPALVEPEPRPTDSSIGKESLKKRKPDKLHNTKFVTENDMKDKRIKVGTDDEQSKITGSPKSNTKTNCNQRETCADTSNSKQNSKPSEVQNHKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDFSVDDLFEKEVFPASAANFPNIGISSDLTNSAYLQFNSPQQMVSYGGGLDTGINPPYTGLKRSTSAHVSMPETYLHSSCFTQMLPSSAWEGDFQNLCNLDFDQVRATSFPSHLSSGLVEAGNHLKMEM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00158 403 MobiDBLite consensus disorder prediction 153 191 - -
Phco7g00158 403 FunFam Basic helix-loop-helix transcription factor 203 275 - -
Phco7g00158 403 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 96 312 IPR024097 GO:0006355
Phco7g00158 403 CDD bHLH_AtBPE_like 196 281 - -
Phco7g00158 403 MobiDBLite consensus disorder prediction 113 152 - -
Phco7g00158 403 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 204 275 IPR036638 GO:0046983
Phco7g00158 403 Gene3D - 203 276 IPR036638 GO:0046983
Phco7g00158 403 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 206 256 IPR011598 GO:0046983
Phco7g00158 403 SMART finulus 212 262 IPR011598 GO:0046983
Phco7g00158 403 Pfam Helix-loop-helix DNA-binding domain 210 257 IPR011598 GO:0046983
Phco7g00158 403 MobiDBLite consensus disorder prediction 99 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00158 Phco-Chr7 992591 994926 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Phco7g00158 HLH 2.3e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00158 7 992591 994926 Phco7g00158 7 992591 994926 ECH