Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00154 ATGGCAGATCTTGTATACTTGGACCATGCTGGGGCAACTCTATACTCTGACCTGCAAATGGAATCAGTTTTCAACAATCTCACCAATAACGTATATGGAAATCCTCATTGCCAAAGGGACTCCAGTTCTGCAACTCTTGACATTGTGAAGAATGCCCGCCAGCAGGCACAGTTTAGGAACAAATGGGCGAAAATTGCAACGTATTTGGCAGGGAGAACGGACAATGATGTGAAAAACTTTTGGAGCAGTAGGAGAAAAAGGTTGGAGAGGATGTTGGAGAAGCCACCAACGTTAAAGCTGCAGAAAAACAAGGGAAAAACACATTTTGTTTTTTTCATTAGACCCTCCTTAGTTTGGGAGTGTCTTTACTACTGA 375 0.4267 MADLVYLDHAGATLYSDLQMESVFNNLTNNVYGNPHCQRDSSSATLDIVKNARQQAQFRNKWAKIATYLAGRTDNDVKNFWSSRRKRLERMLEKPPTLKLQKNKGKTHFVFFIRPSLVWECLYY 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00154 124 CDD SANT 59 81 IPR001005 -
Phco7g00154 124 Gene3D - 26 109 - -
Phco7g00154 124 PANTHER TRANSCRIPTION FACTOR DUO1 55 107 - -
Phco7g00154 124 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 53 89 IPR017930 -
Phco7g00154 124 Pfam Myb-like DNA-binding domain 57 82 IPR001005 -
Phco7g00154 124 SUPERFAMILY Homeodomain-like 56 90 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00154 Phco-Chr7 970146 978836 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g00154 Myb_DNA-binding 4.4e-06 CL0123