Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00073 ATGACTTGGTGGTTTGTTGAGGATATGATTTGGGATGGAAATGGGCATTTAGAAATTAGAATGTGGAGAGGAGTGAGAGTGAGTGGTGATTATAGAACTGTGAAAGAGTGGGTATTACATAAAGAAAAGCAAAGAAAAGTTTTGGTTAAAGAAGAAGATTGGAAGTGGAAGTGGAAGTGGAAGCGGAACCGGATGGAGGGTGAGGATGATATAGGGGGTTGGGTGTTAGAGTTCCTTCTTCGGAGCCCACCGGCAGTGGCAAGCAATAACCTAATCAAAAATGTGTTTCGGTTTATCCCCGTTTCTGACGCCAATTCGCGCCTCAAGAAGACCCTTCTCCTCAGAACTCTTCAGGACCACCTCTCCACTCTCTCCATTAATGAATCCCTTCTCAAAACCCTCGAGCTCCTCGAGGAACTCCTACGCCGCGACGCCTCTCCAGTCACCGCCACCATGACCGCTGCCTACTGCGCCGTTGCGGTCGACTGCACGCTCAAGTACCTGCGTGTGAATCTCCACCACCACAACTCTGCCTACCTCCGCGCTGTTAACAGGATATGGCGAGCTAGGGTTTCGCACATGAACGGCTCCGGTTCCAGAGAGGGAAGCCTTCTGTTCTCCGCAGAGTTGGAGCGGTGGAGAAGCGACATCGAAGCTTCCCTTTCGGATTCGCAAGTGAGGGAGAGGTTGGCCTCCAAATATGACAGAAAGGATGCCATCATGAAGCTCAAGGCTCTTTTGGCCGAAGCCTGGACCGATTTGGGCCCTTCTTTTCTTCGGTTAGCGGCGTCAATGCACGGGAGCAGGGCCCCACAACGCCAAGAGGGAGAAATTCAGAAGTGTAGCAGTGCTGCTGCTGAAAATTTGCGTTTAACTATTGACCTTGAAAAGGTTGGGGATTGCATTTTTGGGGAGTTGCAAATGTTGGCTAAGGATTTTCAACTTAATTCATTTGAAGAAAATGAGGAGGCACCAACTGAAAAACAGAGTGGAGAGGCAGATGTATCTGGCTCACTCGGCATTAATAATAATGAGGCTGATCCCATGGAAAAGGATCGAACTTCTATCCCTCAGAATTGTGACCGAAGGCCTAGTTTGATGGAAAAAAATATTACTGCTCGTGTGTTTGAGTGGGATGATTCGATAGACGGTGGAACATCAAACTATGCAAGTAGATTTAATTTGCCTACTCCAAAGAGGAGACCACTTTCTCCATTGAAGATATATAAACCAACAAGCATTACAAAAAGGAGAAAAGGAAAAAAATGGAGTCAGTTAGAAGAGGAGACGCTTAGGACTGGCGTAGACAAGTTTGGCAGGGGAAATTGGAAGTTAATCCTAAATTCTCACAAAGATATATTTGAAGAGAGAACTGAAGTTGATTTGAAGGACAAGTGGAGAAATATGACGCGGTATGGGTGCAAATGA 1428 0.4671 MTWWFVEDMIWDGNGHLEIRMWRGVRVSGDYRTVKEWVLHKEKQRKVLVKEEDWKWKWKWKRNRMEGEDDIGGWVLEFLLRSPPAVASNNLIKNVFRFIPVSDANSRLKKTLLLRTLQDHLSTLSINESLLKTLELLEELLRRDASPVTATMTAAYCAVAVDCTLKYLRVNLHHHNSAYLRAVNRIWRARVSHMNGSGSREGSLLFSAELERWRSDIEASLSDSQVRERLASKYDRKDAIMKLKALLAEAWTDLGPSFLRLAASMHGSRAPQRQEGEIQKCSSAAAENLRLTIDLEKVGDCIFGELQMLAKDFQLNSFEENEEAPTEKQSGEADVSGSLGINNNEADPMEKDRTSIPQNCDRRPSLMEKNITARVFEWDDSIDGGTSNYASRFNLPTPKRRPLSPLKIYKPTSITKRRKGKKWSQLEEETLRTGVDKFGRGNWKLILNSHKDIFEERTEVDLKDKWRNMTRYGCK 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00073 475 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 415 474 IPR017930 -
Phco7g00073 475 SMART sant 419 472 IPR001005 -
Phco7g00073 475 Gene3D - 423 475 - -
Phco7g00073 475 CDD SANT_TRF 421 471 - -
Phco7g00073 475 SUPERFAMILY Homeodomain-like 417 471 IPR009057 -
Phco7g00073 475 MobiDBLite consensus disorder prediction 319 362 - -
Phco7g00073 475 Pfam Myb-like DNA-binding domain 421 469 IPR001005 -
Phco7g00073 475 PANTHER MYB TRANSCRIPTION FACTOR 70 472 - -
Phco7g00073 475 ProSiteProfiles Myb-like domain profile. 415 470 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00073 Phco-Chr7 484300 488284 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Phco7g00073 Myb_DNA-binding 1.7e-07 CL0123