Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Phco7g00066 | ATGCAGCACTTTATTCCGGGAATTGAAGCAATGCGAAAGGCGATCTCCTTCCTCGTTCAACCGCGATGCCTCCTTCTCGTCATTGTTCTCACAATTTTCTTGATTCTCGCAATATCTGGCTCCAGACGGGTTGAAGAGAAAGAAGAAGAAGAGCCTGAAATTACAGACAGAGTATTCTTGGATGTTGATATTGATGGACAACGTTTAGGTAGGATTGTCATTGGATTATACGGCCAAGTTGTACCAAAAACTGTGGAAAATTTTAGAGCTTTGTGCACAGGGGAGAAAGGAAAGAATGCCAATGGTGTAAAACTTCACTACAAAGGAACACCATTTCATAGGATAATATCTGGTTTCATGTTTCAGGGTGGTGACATTGTCCACCATGATGGTAGAGGATATGAATCTATTTATGGTGGTACCTTTCCTGATGAGAATTTCAAGATAAAACATTCACATGCGGGTGTAGTCTGTATGGTGAATTCAGGTCCTGATTCCAATGGCTCACAGTTTTTTATTACCACAGTGAAGACCGGTTGGTTAGATGGAGAACATGTTGTGTTTGGGAAGGTTGTCCAAGGCATGGATACTGTGTTTGCAATTGAAGGGGGTGCTGGAACCTACAATGGGAAACCCAGAAAGAAAGTAGTCATTGCAGACTCTGGACTCTGGAGAGATACCCAAGAGTCTGTGGGATGA | 699 | 0.4263 | MQHFIPGIEAMRKAISFLVQPRCLLLVIVLTIFLILAISGSRRVEEKEEEEPEITDRVFLDVDIDGQRLGRIVIGLYGQVVPKTVENFRALCTGEKGKNANGVKLHYKGTPFHRIISGFMFQGGDIVHHDGRGYESIYGGTFPDENFKIKHSHAGVVCMVNSGPDSNGSQFFITTVKTGWLDGEHVVFGKVVQGMDTVFAIEGGAGTYNGKPRKKVVIADSGLWRDTQESVG | 232 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Phco7g00066 | 232 | PANTHER | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE | 57 | 222 | - | - | |
| Phco7g00066 | 232 | Gene3D | - | 43 | 231 | IPR029000 | - | |
| Phco7g00066 | 232 | ProSiteProfiles | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 59 | 223 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | FunFam | Peptidyl-prolyl cis-trans isomerase | 44 | 229 | - | - | |
| Phco7g00066 | 232 | SUPERFAMILY | Cyclophilin-like | 54 | 226 | IPR029000 | - | |
| Phco7g00066 | 232 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 170 | 182 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 76 | 91 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 183 | 198 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 155 | 170 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | PRINTS | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 112 | 124 | IPR002130 | GO:0000413|GO:0003755 | |
| Phco7g00066 | 232 | ProSitePatterns | Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. | 107 | 124 | IPR020892 | GO:0003755|GO:0006457 | |
| Phco7g00066 | 232 | Pfam | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 62 | 220 | IPR002130 | GO:0000413|GO:0003755 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Phco7g00066 | Phco-Chr7 | 439389 | 444686 | Dispersed/Wgd |