Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00062 ATGGGAAGGTCCCCTTGTTGTGAGAAAGCACACACAAACAAAGGTGCATGGACCAAAGAAGAAGACGATCGCCTCATAGCTTACATTAGAGCTCACGGTGAAGGCTGCTGGCGCTCTCTCCCCAAAGCCGCCGGCCTTCTCCGCTGCGGCAAGAGCTGCCGTCTCCGCTGGATCAACTACCTCCGCCCTGACCTCAAACGCGGGAATTTCACAGAAGAAGAGGATGAACTCATCATCAAACTCCACAGCCTCCTTGGGAACAAGTGGTCTCTGATAGCTGGAAGATTGCCGGGGAGAACAGACAATGAGATAAAGAATTACTGGAACACTCACATAAGAAGGAAGCTTTTGAGCAGAGGAATTGACCCTGCAACTCACAGGCCTCTCACCGACTCTCCTCGTCAAAATCAGGTCCAAGAATCCGGCGGCGCAGCCACCATATGTTTTGCTCCCAAACAAGAGGAAAAGGAGAACGTGTTGGTGGAGGTTAAGGATTCGAAAAGTCCCACATCGGAACGGTGCCCTGACTTGAACCTTGAGCTAAGCATCAGTCCTCCCCATCATGAGCGGGAGGAGGGTGATGACGAAGATGAATTGAAGAGTATTGGGAGAAGCCTTTGCTTTGCCTGCAGTTTGGGTTTGCAAAACAGCAAAGACTGTGCCTGTGCCCTCAATGCCAACACTGCTAATGCCAACGCTTCTGCTGCCACTGGCTTTGATTTCTTGGGCTTGAAAACCAATCCTTTGGACTACAGAACCTTGCAAATGAAATTAAATTAA 780 0.5013 MGRSPCCEKAHTNKGAWTKEEDDRLIAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKLLSRGIDPATHRPLTDSPRQNQVQESGGAATICFAPKQEEKENVLVEVKDSKSPTSERCPDLNLELSISPPHHEREEGDDEDELKSIGRSLCFACSLGLQNSKDCACALNANTANANASAATGFDFLGLKTNPLDYRTLQMKLN 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00062 259 FunFam Myb transcription factor 68 137 - -
Phco7g00062 259 CDD SANT 69 112 IPR001005 -
Phco7g00062 259 SMART sant 66 114 IPR001005 -
Phco7g00062 259 SMART sant 13 63 IPR001005 -
Phco7g00062 259 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Phco7g00062 259 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Phco7g00062 259 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 167 - -
Phco7g00062 259 CDD SANT 16 61 IPR001005 -
Phco7g00062 259 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Phco7g00062 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Phco7g00062 259 Gene3D - 69 141 - -
Phco7g00062 259 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Phco7g00062 259 Gene3D - 14 66 - -
Phco7g00062 259 FunFam MYB-related transcription factor 13 66 - -
Phco7g00062 259 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
Phco7g00062 259 MobiDBLite consensus disorder prediction 161 196 - -
Phco7g00062 259 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00062 Phco-Chr7 408829 409696 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Phco7g00062 Myb_DNA-binding 3.6e-14 CL0123