Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00056 ATGGAACACACCAATAATACCATGTCTCGCACCATTCTTTTCATGGCATTGCTTTCCATCATTGTGGCTGCGGCACATGCACGTGGTCATCATAAGGGAGCGCATGGTCGTCACATGACTGCTCAAAATGTCACTTATGATGGTAAGTCCATGTTCATCAATGGAAGGCGCGAGCTGCTCTTTTCTGGTTCCATCCATTACCCACGGAGCACACAAGATATGTGGCCTGTCCTTCTTGATAATGCAAGACGTGGAGGCATAAATGTCATTCAAACCTACGTGTTTTGGAATGCTCACGAGCCCCAACAAGGACAGTTCAACTTTGCTGGTAATTATGACTTGGTGAAGTTTATTAAGCTCGTTCAAGAACATGGAATGTTTGTCACTCTCAGGGTTGGACCCTTCATCCAAGCTGAGTGGAACCACGGAGGTCTTCCATATTGGCTTAGAGAGGTTCCTGGCATCATTTTCCGCTCTGACAATGAGCCTTACAAGCAATACATGCAAGCATTCGTGACAAAGATTGTACAAATGATGAAAGATGAGAAGCTCTTTGCTCCCCAAGGAGGACCCATCATCTTAGCTCAGATTGAGAACGAGTACAACCACATTCAACTTGCATATGAAGAGAAGGGAGACAGTTACGTCCAGTGGTCTGCAAACATGGCAGTAGCACTAAATGTTGGAGTTCCATGGGTCATGTGCAAGCAAAGAGATGCACCTGATCCAGTGATCAATGCATGCAATGGAAGACATTGCGGTGATACCTTCTCAGGACCAAACAAACCATACAAACCATCCATATGGACAGAGAACTGGACCGCTCAGTACCGAGTACATGGAGATCCACCATCCCAAAGATCCGCAGAAGATATTGCATTCTCAGTTGCCCGCTTCTTCTCCAAGGGTGGAAACTTGGTTAACTATTATATGTATCACGGTGGAACAAACTTTGGTAGAACCAGTTCTGCATTTACCACTACTCGTTATTACGATGAGGCTCCGCTTGATGAATATGGTCTACAGAGAGAACCAAAATGGAGTCATTTGAGGGATGTGCACAAAGCAGTGCTCCTTTGCAGGAAGGCTATCCTTGGTGGCGATACCAATGTACAAAAGTTGAACGAATTCCATGAAATTAGAACCTTTGAGAAGCTTGGAACAAACATGTGTGCTGCTTTCATCACTAACAACCACACCACAGATGCAGCCACTGTTAACTTTAGAGGCACCAACTACTTTTTGCCTCCACATTCCATTAGCGTCCTCCCTGATTGCAAGACCGTCGTTTACAACACACAAAGTATTGTTTCACAACATAATTCAAGGAACTACGAGAGGTCGCCCATTGCAAACAATTTCCAATGGGAGATGTTCAACGAGGCTATTCCAACAACCAAAAAAATGGATACATACCAGAAGCTTCCGGCAGAGCTTTATAGCTTGCTCAAGGACACCACAGATTATGCTTGGTACACCACCAGCTTTGAGTTGAGTCCACAAGACTTGCCAACAAAGCCTGGAGTTATCCCAGTTCTTCGTATTATGAGTCTCGGACACTCAATGGTTGCATTTGTAAACGGAGATCTTGTTGGAACTGCTCATGGAACCCATGAAGAAAAATCTTTTGAGTTTCAGCGACCAGTAGCATTTAGGGTTGGAACCAACTATATTTCCATCTTGGCTAGCACTGTTGGATTACCCGACAGTGGAGCTTACATGGAACATAGATACGCAGGACCCAAGTCCATATCCATCCTTGATCTCAACACCGGAACAATGGATGTCACTGACAATATGTGGGGTCATCGGGTTGGTCTCAAAGGTGAGGGCATGAATGTTTTCAGTGAGGAAGGATCATTGAAGGCAAAATGGAAGCCACTCACTCCAGTTCCACGCCCTTTAACATGGTTCCACATTCCAAGATCTTTCCTCCACCCACAAGACAACTTACTTGTTATATTTGAAGAGGAGCCAATGAGTCCAGGACAAGTTGAGGTATTGAACGTGAACAGAGACACAATTTGCAGTTTCATTGCAGAGAACGAGCCTGCAAATGTCAACTCATGGGTGTCTAGGAGAGGAAGTTTCCACCCTATCGTGCCACATATTGGACCCCAAGCCGCACTAGAGTGCAGTCCTGGAAAAAAAATTACGACAATTGAGTTTGCAAGTTTTGGCAATCCTAGTGGTTATTGTGGAGATTATGTTTTGGGAAGTTGTAATGTTGCTGCTACGAAGCAAATTGTGGAAAAACAATGCTTGGGCAAAGAAACTTGCACAGTTGCATTAGACCGTGCAGTGTTGAACCAAAATGGCGCAGATCCATGTCCAGAAATATTGGTGAAAACCCTTGCAATCCAAGCAAGGTGTTATTAG 2379 0.446 MEHTNNTMSRTILFMALLSIIVAAAHARGHHKGAHGRHMTAQNVTYDGKSMFINGRRELLFSGSIHYPRSTQDMWPVLLDNARRGGINVIQTYVFWNAHEPQQGQFNFAGNYDLVKFIKLVQEHGMFVTLRVGPFIQAEWNHGGLPYWLREVPGIIFRSDNEPYKQYMQAFVTKIVQMMKDEKLFAPQGGPIILAQIENEYNHIQLAYEEKGDSYVQWSANMAVALNVGVPWVMCKQRDAPDPVINACNGRHCGDTFSGPNKPYKPSIWTENWTAQYRVHGDPPSQRSAEDIAFSVARFFSKGGNLVNYYMYHGGTNFGRTSSAFTTTRYYDEAPLDEYGLQREPKWSHLRDVHKAVLLCRKAILGGDTNVQKLNEFHEIRTFEKLGTNMCAAFITNNHTTDAATVNFRGTNYFLPPHSISVLPDCKTVVYNTQSIVSQHNSRNYERSPIANNFQWEMFNEAIPTTKKMDTYQKLPAELYSLLKDTTDYAWYTTSFELSPQDLPTKPGVIPVLRIMSLGHSMVAFVNGDLVGTAHGTHEEKSFEFQRPVAFRVGTNYISILASTVGLPDSGAYMEHRYAGPKSISILDLNTGTMDVTDNMWGHRVGLKGEGMNVFSEEGSLKAKWKPLTPVPRPLTWFHIPRSFLHPQDNLLVIFEEEPMSPGQVEVLNVNRDTICSFIAENEPANVNSWVSRRGSFHPIVPHIGPQAALECSPGKKITTIEFASFGNPSGYCGDYVLGSCNVAATKQIVEKQCLGKETCTVALDRAVLNQNGADPCPEILVKTLAIQARCY 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00056 792 PANTHER BETA-GALACTOSIDASE RELATED 35 639 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 Gene3D - 372 580 - -
Phco7g00056 792 Pfam Beta-sandwich domain in beta galactosidase 365 435 IPR041392 -
Phco7g00056 792 Pfam Galactose binding lectin domain 710 791 IPR000922 GO:0030246
Phco7g00056 792 Gene3D Glycosidases 40 359 - -
Phco7g00056 792 Pfam Glycosyl hydrolases family 35 50 356 IPR031330 -
Phco7g00056 792 Gene3D - 704 792 IPR043159 -
Phco7g00056 792 SUPERFAMILY Galactose-binding domain-like 630 696 IPR008979 -
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 324 340 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 268 283 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 305 320 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 54 71 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 130 149 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 75 93 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 487 501 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 PRINTS Glycosyl hydrolase family 35 signature 187 202 IPR001944 GO:0004553|GO:0005975
Phco7g00056 792 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 189 201 IPR019801 GO:0004553|GO:0005975
Phco7g00056 792 ProSiteProfiles SUEL-type lectin domain profile. 702 792 IPR000922 GO:0030246
Phco7g00056 792 SUPERFAMILY (Trans)glycosidases 41 360 IPR017853 -
Phco7g00056 792 FunFam Beta-galactosidase 40 360 - -
Phco7g00056 792 SUPERFAMILY Galactose-binding domain-like 420 580 IPR008979 -
Phco7g00056 792 CDD Gal_Rha_Lectin_BGal 703 791 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00056 Phco-Chr7 359044 363516 Dispersed/Wgd