Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00045 ATGGCTGTTTCCGCTATCACTGGAGCGAGGCTATCCCTAGGGATGCCTCTTTCCTCTCCCACGCTCACACGCAGAACAACTCCTCCCTCGCTCGTTATGGCCGTCTCCATTGACCACAAGACCGACAAAAAACTCACTCTTACCAAATCCGAGGAGGCTTTCGCTGCTGCCAAGGAGCTGTTGCCTGGAGGTGTGAACTCCCCAGTTCGTGCCTTCAAATCGGTGGGTGGCCAACCAATTGTGATTGATTCGGTGAAAGGGTGTCGCATGTGGGACATCGATGGAAATGAGTACATTGACTACGTCGGTTCTTGGGGTCCTGCTATTATTGGTCACGCTGATGATCAGGTGCTTGCAGCTCTAGGCGAAACCATGAAGAAAGGAACAAGCTTTGGCGCACCCTGTTTGTTGGAAAACACTTTGGCTGAGCTGGTTATCGATGCCGTCCCTAGCATTGAAATGGTTCGGTTTGTCAATTCAGGCACAGAAGCTTGCATGGGTGCGCTCCGTCTTGCACGTGCTTATACAGGACAAGAGAAGATCATCAAGTTTGAGGGGTGTTATCATGGCCATGCGGATCCTTTTCTTGTTAAGGCTGGTAGTGGAGTTGCCACGTTAGGACTTCCTGATTCCCCTGGTGTCCCCAAAGCCGCCACGTATGAAACCCTTACAGCCCCCTACAATGACATCTTGGCCGTTGAGGAGCTCTTTGAGAATAACAAAGGAGAAATTGCCGCTGTTTTCCTGGAACCTGTTGTTGGAAACGCTGGTTTCATTGTTCCTACACCTGAATTTCTTAATTTCTTGCGCAAAATCACCAAAGAGAACAATACACTTCTTGTGTTTGATGAAGTTATGACCGGATTTCGATTGTCATATGGAGGTGCCCAAGAGTATTTTGGTATAACTCCTGATTTAACAACTCTAGGAAAGATCATTGGTGGAGGTCTGCCGGTGGGCGCTTATGGTGGGAGGAGGGATATTATGGAGATGGTGGCACCAGCTGGACCAATGTACCAGGCTGGGACCTTGAGTGGGAACCCTTTGGCCATGACTGCAGGCATACACACCCTGCAGCGTATTAAGGAGCCAGGAACTTACGAGTACTTGGACAAAGTCACAGGTGAGCTTGTTCAGGGCATTATTGAAGCTGGGAAGAGGGCAGGCCATGCAATATGTGGTGGGCATATAAGTGGGATGTTTGGGTTTTTCTTCACAGAAGGACCTGTGTATAATTTTGCAGATGCTAAGAAGAGTGACACTGCCAAGTTTGCTAGGTTCTTTTGGGGAATGCTGGCAGAAGGTGTCTATTTGGCACCTTCACAGTTTGAGGCTGGCTTCACCAGCTTGGCACATACTTCTGATGACATTAAAAAGACAATAGCCGCTGCTGAGAAAGTTTTCAGAGAGATCTGA 1416 0.4873 MAVSAITGARLSLGMPLSSPTLTRRTTPPSLVMAVSIDHKTDKKLTLTKSEEAFAAAKELLPGGVNSPVRAFKSVGGQPIVIDSVKGCRMWDIDGNEYIDYVGSWGPAIIGHADDQVLAALGETMKKGTSFGAPCLLENTLAELVIDAVPSIEMVRFVNSGTEACMGALRLARAYTGQEKIIKFEGCYHGHADPFLVKAGSGVATLGLPDSPGVPKAATYETLTAPYNDILAVEELFENNKGEIAAVFLEPVVGNAGFIVPTPEFLNFLRKITKENNTLLVFDEVMTGFRLSYGGAQEYFGITPDLTTLGKIIGGGLPVGAYGGRRDIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLQRIKEPGTYEYLDKVTGELVQGIIEAGKRAGHAICGGHISGMFGFFFTEGPVYNFADAKKSDTAKFARFFWGMLAEGVYLAPSQFEAGFTSLAHTSDDIKKTIAAAEKVFREI 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00045 471 SUPERFAMILY PLP-dependent transferases 47 470 IPR015424 -
Phco7g00045 471 Hamap Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 49 471 IPR004639 GO:0033014|GO:0042286
Phco7g00045 471 ProSitePatterns Aminotransferases class-III pyridoxal-phosphate attachment site. 280 316 IPR005814 GO:0008483|GO:0030170
Phco7g00045 471 PANTHER GLUTAMATE-1-SEMIALDEHYDE 2,1-AMINOMUTASE 33 470 - -
Phco7g00045 471 Gene3D Aspartate Aminotransferase, domain 1 52 464 IPR015422 GO:0003824
Phco7g00045 471 Pfam Aminotransferase class-III 79 388 IPR005814 GO:0008483|GO:0030170
Phco7g00045 471 CDD OAT_like 54 468 IPR005814 GO:0008483|GO:0030170
Phco7g00045 471 FunFam Glutamate-1-semialdehyde 2,1-aminomutase 357 464 - -
Phco7g00045 471 Gene3D - 115 363 IPR015421 GO:0003824
Phco7g00045 471 NCBIfam glutamate-1-semialdehyde 2,1-aminomutase 49 470 IPR004639 GO:0033014|GO:0042286
Phco7g00045 471 FunFam Glutamate-1-semialdehyde 2,1-aminomutase 115 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00045 Phco-Chr7 280739 282557 Dispersed