Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00042 ATGTCGCACATTCAGGATTCCTATTTAAAGATTTATCTGTATTCTTGCAAACTCTTCATTTCTTTATTTATAGAGCCCTCCCTAAGGAAGAAAAGCAGAGAAATGGTGGTTGGGAGAGTTCTTGTTCCGAATCCTCCCTCCAATCTGTTCCACAATCCTTCTTCTGCTGCCACGCTCATACCTCCACACACTCGTCTTCTCTCTTTCTCCGCTTCCGCCGCCGCCTCCTCCTCCTCCTCCTCCTCCTCCGCCAATCGCACTCGCCACACTCCCACTACCAACAACGACTCTCCCTTCTCAACTTTCGGAAGACTCAAGGATCAGAAACCGAAGACTCTGCTTCACAGAAGCAAGGACCGAAGACGCGAAGAAGAAGAAGACGATAACGATGATGAGGAGGACTACAATGACAATCACGCAGCCCCCAGACGCAGACCTTCTCAGTCACGGTCTCGGTCAGGTGGACGAGAACGAGGAGGATGGGATATCATTCCCAGGTTTCCCTCACAAGCCAAATCCACCACTGACACCAACTTCTTCAGTCTCAAGTCATTTAAAGAAGTTGGGTGCGCTGACTACATCCTTCAATCCCTCCAAAAAATCCTCTTAACGCGCCCTTCCCATGTGCAGGCCATGGCTTTTGCTCCTGTTCTCAGCGGAAAGACTTGTGTCATAGCTGACCAAAGTGGTTCTGGAAAGACATTAGCTTATCTTGTACCAATCATTCAGCGTGTTAGACAAGAAGAACTTGAAGGACGTAGTCAATCCTCTTCACAAGCTCCTAGAGTCCTTGTACTCGCACCCACTGCGGAGTTAGCTTCTCAGGTCTTAGATAATTGTCGATCCTTGTCAAAATCTGGGGTTCCATTCAAATCTATGGTTGTCACGGGAGGTTTTCGACAAAGGACTCAACTGGAAAGTTTACAGCAAGGAGTTGATGTCTTAATAGCTACGCCTGGCCGTTTTTTGTACCTCATGAATGAAGGCTTCTTGCAGTTAACAAATCTAAGATGTGCTGTGTTGGATGAGGTAGATATTCTCTTTGGTGATGAGGACTTTGAAGTGGCTCTTCAACGCCTGATCAGTTCATCACCGGTTGACACACAGTATCTATTTGTGACTGCAACTTTACCAAAAAATGTTTTCACCAAATTGGTTGAAGTTTTTCCCGATTGTGAAATGATTATGGGACCTGGTATGCATCGTATAAGTTCTCGCCTTGAGGAGATTCTAGTAGATTGCAGTGGAGAGGATGGACAAGATAAAACTCCTGATACAGCATTTTTGAACAAGAAAACCGCACTTGTGCAGCTTGTGGAGGAAAGTCCTGTTCCAAGAACTATTGTGTTCTGCAACAAGATTGAAACATGCAGAAAAGTTGAAAATTCATTAAAGCGTTTTGATAGAAAAGGAAATCGCATGCAAGTTCTACCTTTCCATGCTGCCATGACACAAGAATCACGGCTTGCTAGCATGGAAGAGTTTACACGTTCTCCATCAAAAGGAGTCTCCCAGTTTATGGTTTGCACCGACAGGGCTTCCCGGGGAATAGACTTTGCAGGAGTGGATCATGTCATACTCTTTGACTTCCCGCGTGATCCAAGTGAATATGTAAGGCGTGTTGGAAGAACAGCCAGAGGGGCGAAGGGAGTAGGAAAGGCATTTATTTTTGTGGTTGGCAAGCAAGTATCCCTTGCAAGCAAGATAATGGAAAGAAGTCGGAAGGGTCACCCGCTACATGATGTGCCTTCGCCATATTAG 1761 0.4583 MSHIQDSYLKIYLYSCKLFISLFIEPSLRKKSREMVVGRVLVPNPPSNLFHNPSSAATLIPPHTRLLSFSASAAASSSSSSSSANRTRHTPTTNNDSPFSTFGRLKDQKPKTLLHRSKDRRREEEEDDNDDEEDYNDNHAAPRRRPSQSRSRSGGRERGGWDIIPRFPSQAKSTTDTNFFSLKSFKEVGCADYILQSLQKILLTRPSHVQAMAFAPVLSGKTCVIADQSGSGKTLAYLVPIIQRVRQEELEGRSQSSSQAPRVLVLAPTAELASQVLDNCRSLSKSGVPFKSMVVTGGFRQRTQLESLQQGVDVLIATPGRFLYLMNEGFLQLTNLRCAVLDEVDILFGDEDFEVALQRLISSSPVDTQYLFVTATLPKNVFTKLVEVFPDCEMIMGPGMHRISSRLEEILVDCSGEDGQDKTPDTAFLNKKTALVQLVEESPVPRTIVFCNKIETCRKVENSLKRFDRKGNRMQVLPFHAAMTQESRLASMEEFTRSPSKGVSQFMVCTDRASRGIDFAGVDHVILFDFPRDPSEYVRRVGRTARGAKGVGKAFIFVVGKQVSLASKIMERSRKGHPLHDVPSPY 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00042 586 Pfam DEAD/DEAH box helicase 208 381 IPR011545 GO:0003676|GO:0005524
Phco7g00042 586 Pfam Helicase conserved C-terminal domain 431 547 IPR001650 -
Phco7g00042 586 CDD SF2_C_DEAD 407 558 - -
Phco7g00042 586 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 76 583 - -
Phco7g00042 586 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 434 586 IPR001650 -
Phco7g00042 586 CDD DEADc 194 381 - -
Phco7g00042 586 MobiDBLite consensus disorder prediction 75 173 - -
Phco7g00042 586 Gene3D - 428 581 IPR027417 -
Phco7g00042 586 SMART helicmild6 458 548 IPR001650 -
Phco7g00042 586 MobiDBLite consensus disorder prediction 136 159 - -
Phco7g00042 586 MobiDBLite consensus disorder prediction 75 102 - -
Phco7g00042 586 Gene3D - 164 394 IPR027417 -
Phco7g00042 586 SMART ultradead3 202 410 IPR014001 -
Phco7g00042 586 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 214 395 IPR014001 -
Phco7g00042 586 MobiDBLite consensus disorder prediction 108 124 - -
Phco7g00042 586 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 217 559 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00042 Phco-Chr7 263421 268801 Dispersed/Transposed