Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00036 ATGACGATCCATTCGATAGTGATACAGAAGCTGCTGAGCACGAATGCGCAGGTGGGACGACGAGTTGCTGCTGACCATTTCAAGGGCTACACCTATGGCTTCCGCAACAAGATGGCCATCATCGACTCCGATAAAACCCTCATTTGCATGCGCAGCGCCTTCAACTTCGTCGCCTCCCTCGCCCGCCACAACGCCCGCTTCATGTTCATCAACACCAACCCTCTCTTCGACGACATCTTCAACCTCATGACCAAGAAGGTTGGCTCCTACTCCATCTCCACCAGCTCCCTCTGGCGCACCGGCGGCTTCCTCACCAACAGTTACAGCCCCAAGAAGTTCCGCTCCCGCAACAAGAAGCTCGTCTTCGGCCCCACCCAGTCCCCCGATTGCATCGTCATTGTCGACACCGACCGCAAGTCTTCCGTCATCAACGAGGCTTTCAAGCTTCAAATTCCCGTTGTTGCATTGGTCGACTCCGCCATGCCCCTCGATGTCTACAACCGCATTGCTTATCCTGTTCCCGCCAACGATTCTGTTCAATTCGTTTATCTGTTCTGTAATTTGATTACCAAAACACTGCTTCATGAGAAGAGCAAGTCTGCTGCTGCCGCTAATCTCAACATTGATTCTCGAGATGAAGCTCCGTGCAAGGGCAAGAGCGATTTGGATAAGGTCGGCATAACCGTAGTTCCCTATTCTAGTTTAGCTCCCTTATCCGAAGATACAGAGGAAACTAAGAAGCTTTTGGACAAACTTGTTGTTTTGAAGTTCAATGGTGCCCAAGGAGGAAATATGGGTTTTGAGGGTCCCAAATCTGCAATTAATATTAGTGATGGACAGACATTTCTGGACTTGATCATTAACCAGATTGAGATGCTCAACTCCAAGTATGGATGCAGGGTTCCGTTGCTTCTTTTCAACAAAAATGACATTCATGATAGTTCTCTAAAGGTTTTGGAGAAGTATTCAAAATCAAGTGTTCAAGTGCACACATTGAAGCAGGGTGAAGGTGGAAAATTGAAATTATCGAGGGAAGATTCCAGTGAGGCGGAAGTGCATCCATTTGATGATGTTGATGTGTTGCATTCACTCATGACTGGTGGAACCCTTGATTCATTATTGTCACAGGGTAAAGAGTATATCCTAGTGTTGAAGTCAGACAATGTGGCAACAATTGTTGATCCTAATATACTAAATCATTTGATGATAAATGATATTGAATATTGCATGGAGGTGACAGCAAACCATAACTTAATCTTAACCGCAATGAAATTGAAGCTTCGGGAGATTGCTCGAAACCAAGATAAAAATTTGAAGAACAATTTCAAACTCATTGATACAACAAATATGTGGGTAAGCTTAAGAGCCATCAAGAGATTTGTTGATGCTGATGAACTAAAGCAGAAGAAGCCCTCAGTTTTGAAGTTCTTTGATAATTTAATTGGTGTCTCTGTGCCCGAGTCTCGGTTTCTTCCATTGGATGCAACATCAGATCTATTTCTTCTTCAGTCAGATCTATACACTTGTAGAGAAGGTGTTTTAACTCGCAATCCAGCCAGAACGAACCAGTTAAATCCCATGATAGACTTGGGACCTGAATTTGAAAAGGTTGGTGACTTCCAAAGTCGTTTAAAATCCATTCCAAGTATCATTGAGCTGGATAGTTTGAGGGTGAGAGGTGATGTGTGGTTTGGAGCTGATATTACTTTGAAGGGGCAAGTGACTATTGCTGCAAAACCTGGCTTGAAATTGGAAATTCCAGATGGGGTGACGATTGAGAACAAGGAGATCAACGACCCTGCAGATATCTGA 1812 0.4437 MTIHSIVIQKLLSTNAQVGRRVAADHFKGYTYGFRNKMAIIDSDKTLICMRSAFNFVASLARHNARFMFINTNPLFDDIFNLMTKKVGSYSISTSSLWRTGGFLTNSYSPKKFRSRNKKLVFGPTQSPDCIVIVDTDRKSSVINEAFKLQIPVVALVDSAMPLDVYNRIAYPVPANDSVQFVYLFCNLITKTLLHEKSKSAAAANLNIDSRDEAPCKGKSDLDKVGITVVPYSSLAPLSEDTEETKKLLDKLVVLKFNGAQGGNMGFEGPKSAINISDGQTFLDLIINQIEMLNSKYGCRVPLLLFNKNDIHDSSLKVLEKYSKSSVQVHTLKQGEGGKLKLSREDSSEAEVHPFDDVDVLHSLMTGGTLDSLLSQGKEYILVLKSDNVATIVDPNILNHLMINDIEYCMEVTANHNLILTAMKLKLREIARNQDKNLKNNFKLIDTTNMWVSLRAIKRFVDADELKQKKPSVLKFFDNLIGVSVPESRFLPLDATSDLFLLQSDLYTCREGVLTRNPARTNQLNPMIDLGPEFEKVGDFQSRLKSIPSIIELDSLRVRGDVWFGADITLKGQVTIAAKPGLKLEIPDGVTIENKEINDPADI 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00036 603 FunFam UTP--glucose-1-phosphate uridylyltransferase 494 603 - -
Phco7g00036 603 Pfam UTP--glucose-1-phosphate uridylyltransferase 229 468 IPR002618 GO:0070569
Phco7g00036 603 Pfam UTP--glucose-1-phosphate uridylyltransferase 473 571 IPR002618 GO:0070569
Phco7g00036 603 Gene3D Hexapeptide repeat proteins 494 603 - -
Phco7g00036 603 Pfam Ribosomal protein S2 11 108 IPR001865 GO:0003735|GO:0005840|GO:0006412
Phco7g00036 603 Pfam Ribosomal protein S2 125 193 IPR001865 GO:0003735|GO:0005840|GO:0006412
Phco7g00036 603 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 197 493 IPR029044 -
Phco7g00036 603 PRINTS Ribosomal protein S2 signature 145 156 IPR001865 GO:0003735|GO:0005840|GO:0006412
Phco7g00036 603 PRINTS Ribosomal protein S2 signature 169 183 IPR001865 GO:0003735|GO:0005840|GO:0006412
Phco7g00036 603 PRINTS Ribosomal protein S2 signature 128 145 IPR001865 GO:0003735|GO:0005840|GO:0006412
Phco7g00036 603 SUPERFAMILY Ribosomal protein S2 8 205 IPR023591 -
Phco7g00036 603 Gene3D - 2 196 - -
Phco7g00036 603 SUPERFAMILY Nucleotide-diphospho-sugar transferases 227 578 IPR029044 -
Phco7g00036 603 PANTHER - 95 603 IPR016267 GO:0003983|GO:0006011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00036 Phco-Chr7 229262 237589 Dispersed