Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00033 ATGGATTCCACTAGGGAAGAAGTGATGGAAAAGGATTTCTGCATTAATACTTTAAGAGCCCATGGACTTCTTAGAGAATATTCTTCTGAACATAATGTGGCTTCTGGGGAAGATGCTGCCATCACACTGGTATTAGCTGCTGTTCCAGAAAAGGCAGAAAAATCTCAAGGAACCAAGGCACCTTTTTTTGAAGTTCAAACTGATGTCTGGGAGTGCTTTTGTGCTATCCATTGGGATCCATCTCATGCTGATTGTGCTGTACCTCAGGAGCTTGAAACAGATCAAGTATTGAAGCAACTGAAATATGTGGAAGTGAAGAGGGTGGTGTTGGGTCCCATTACATGGGTTGATTTGGATGGGAAGAAGAAGAAAAGGAGGGGAAAGAGCAGAAGTAGCGGTGTTGGGTTTTGGCAAAGAAAAGAAAAGATAGAAAATGCAATGAAGAACACAACTTGTACTTCTATTTCAGTTGTGGACGCCTCAACCAATGAACCACCTTCTTCACCTCCATCCTCTGCTATTCTTCTCTTTCACAAACACAATGAAAATGCACAACAAACCCTCGTGCCTTCCAACCCCAACCCCAACCCCAACCCCAACCTCGACGATGGCTTCTATGAAATCGAAACCATACGCCGTAAGAGGGTACGCAAGGGTCAGCTCCAGTACCTAATAAAATGGCGTGGATGGCCTGAGACTGCCAACACCTGGGAGCCTCTTGACAATCTACAGTCCGTTCCTGATCTTCTTCACGCTTTTGAGGACAGTCTCAAGTCAGGAAAAGTTCGCAAGCGCAAGCGCAAGCATGTCGTTCATCACACCAAGGTCAAGAAGCACCCCCAACGTTCTACCACTTCTTACAGCCTTAGACATTTTCCAACTCACAACCCCCATTCTCAAACTCCCATCTTCCCTCACCAACCTCATCCTACCACCCTTCCTCAACCCCAACCAACCAATGTAAACGCCTTTCCAGAACACTACCAAAATGATTATGATCCAAAGCTCAGTGAACTTAAGGCAACAACAAACACTGCCCCTGATCTAGATAACCTTGGAATACATTTCCGGCAACCTAAGGTTTCAACTGCCAATGGTGGTCACCTGGATTGCGCGGAACCAACTCAAACTGGGTCCTGTAGAGGAGCAAAAAGGAGAAAATCTGGTTCTGTCAAGAGCTTCAAGAGAGAGACAGATGCAGGGAAGCCTGTTGTTGCTCTGAATGCAATCAGCTTGCCTGTTGGTGCAGTTGAACCAGGCTGCACGAGAACCGCTGGTTGTGTGGGGAATGATAGTCCTATGAAGATGGATGATGCTAAAACTGCCTGCAATATTGTCAAGATTTTGAAGCCAATAGGTTATTCATCTTCTTTATCCGACAATATGCAGGATGTTTTAGTGACATTTATGGCCATGAGGTCTGATGGAACAGAAGTGATGGTGAATAACAGGTATCTCAAGGCATACAATCCACTTCTGCTGATTAATTTCTATGAGTTGCATCTCCGGTATAGTCCTACATTGTAA 1527 0.4506 MDSTREEVMEKDFCINTLRAHGLLREYSSEHNVASGEDAAITLVLAAVPEKAEKSQGTKAPFFEVQTDVWECFCAIHWDPSHADCAVPQELETDQVLKQLKYVEVKRVVLGPITWVDLDGKKKKRRGKSRSSGVGFWQRKEKIENAMKNTTCTSISVVDASTNEPPSSPPSSAILLFHKHNENAQQTLVPSNPNPNPNPNLDDGFYEIETIRRKRVRKGQLQYLIKWRGWPETANTWEPLDNLQSVPDLLHAFEDSLKSGKVRKRKRKHVVHHTKVKKHPQRSTTSYSLRHFPTHNPHSQTPIFPHQPHPTTLPQPQPTNVNAFPEHYQNDYDPKLSELKATTNTAPDLDNLGIHFRQPKVSTANGGHLDCAEPTQTGSCRGAKRRKSGSVKSFKRETDAGKPVVALNAISLPVGAVEPGCTRTAGCVGNDSPMKMDDAKTACNIVKILKPIGYSSSLSDNMQDVLVTFMAMRSDGTEVMVNNRYLKAYNPLLLINFYELHLRYSPTL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00033 508 Pfam Chromo (CHRromatin Organisation MOdifier) domain 206 255 IPR023780 -
Phco7g00033 508 SMART ChS_2 434 507 IPR008251 GO:0005634
Phco7g00033 508 Gene3D - 177 267 - -
Phco7g00033 508 MobiDBLite consensus disorder prediction 377 396 - -
Phco7g00033 508 MobiDBLite consensus disorder prediction 260 285 - -
Phco7g00033 508 PANTHER CHROMO DOMAIN-CONTAINING PROTEIN LHP1 192 507 IPR044251 GO:0006325|GO:0031507
Phco7g00033 508 CDD CD_CSD 206 255 - -
Phco7g00033 508 ProSitePatterns Chromo domain signature. 223 243 IPR023779 -
Phco7g00033 508 SUPERFAMILY Chromo domain-like 187 262 IPR016197 -
Phco7g00033 508 SMART chromo_7 205 258 IPR000953 -
Phco7g00033 508 ProSiteProfiles Chromo and chromo shadow domain profile. 206 265 IPR000953 -
Phco7g00033 508 MobiDBLite consensus disorder prediction 261 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00033 Phco-Chr7 213610 221165 Dispersed/Proximal