Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00031 ATGCTTCTTCTGATCCGAACACGTCTTAGCTCTATGTCACAGCTGTTGCCCCTCCCACGCAGGACAACTTTATCCCCTATTCCCAAACTTTCTTCCTCCCGAAACAAATCACTTCTTACTAATGAAGAGGCTGTAATAGCTCCTGCTGCATCTGAAGCCCTTGCTCTTGCTAAAGCAGCTGTGAAGGTTGCAAAGGATGCTGCTTTACTAGTAAAAAAGAAGCCCCAAGCAGAAGCAGAGTATAGATCCCAGGTTTCTTCCAAATCTGATGATTTATTTCTCAAATGGTTTCAACATATGGATGTGGAAGATGGTGTAGCAGGGGAATCCATGGGTGCTGGAGCAGAAATGATGAAAGGTGTTGACCTAAGCCCCAACGAAGAGGAATCTGATGTAGAACCTTCCCATGAGGAACTTGAGAGCCTGCAGGAACAGCTTTCCAACAGTATAGCTCCTGGCTCCTCCAGCAGAAGAAAGCGTGTTTCCATGCAAGAAGTAGATTATTCAGATCCACTTCGTTACTTAAGATTAACAGCCACTACTTCTAGGCTTCTCACCTTAACTGAAGAAATCAAGTTGTCAGAAGGAATACAGGAAATAAATTCTGATTCTGACGCCGAAACAACTGAAGAACAGCTCCTTAAGCAATTCATGAAGAAGGACCTTCAAGAGGCACTGGACAGTCTTACTTCAAGGGAGAGACAGGTGGTAAGATGGAGATTTGGCATGGATGATGGAAGGACGAAGACCCTGCAAGAGATAGGGGAGATGATGGGTGTGAGTAGGGAGAGAATTAGGCAAATTGAGTCAAGTGCTTTTAAGAAGCTTAAGAACAAGAAGAGAACCAAACATTTCCAGCAGTATTTGGTTCCATAA 876 0.4406 MLLLIRTRLSSMSQLLPLPRRTTLSPIPKLSSSRNKSLLTNEEAVIAPAASEALALAKAAVKVAKDAALLVKKKPQAEAEYRSQVSSKSDDLFLKWFQHMDVEDGVAGESMGAGAEMMKGVDLSPNEEESDVEPSHEELESLQEQLSNSIAPGSSSRRKRVSMQEVDYSDPLRYLRLTATTSRLLTLTEEIKLSEGIQEINSDSDAETTEEQLLKQFMKKDLQEALDSLTSRERQVVRWRFGMDDGRTKTLQEIGEMMGVSRERIRQIESSAFKKLKNKKRTKHFQQYLVP 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00031 291 Gene3D - 211 291 IPR036388 -
Phco7g00031 291 MobiDBLite consensus disorder prediction 122 163 - -
Phco7g00031 291 CDD Sigma70_r4 219 272 - -
Phco7g00031 291 MobiDBLite consensus disorder prediction 141 159 - -
Phco7g00031 291 PANTHER RNA POLYMERASE SIGMA FACTOR RPO 41 200 - -
Phco7g00031 291 ProSitePatterns Sigma-70 factors family signature 2. 250 276 IPR000943 GO:0003700|GO:0006352|GO:0006355
Phco7g00031 291 PRINTS Major sigma-70 factor signature 250 265 IPR000943 GO:0003700|GO:0006352|GO:0006355
Phco7g00031 291 PRINTS Major sigma-70 factor signature 229 241 IPR000943 GO:0003700|GO:0006352|GO:0006355
Phco7g00031 291 PRINTS Major sigma-70 factor signature 265 276 IPR000943 GO:0003700|GO:0006352|GO:0006355
Phco7g00031 291 SUPERFAMILY Sigma3 and sigma4 domains of RNA polymerase sigma factors 198 287 IPR013324 -
Phco7g00031 291 MobiDBLite consensus disorder prediction 122 140 - -
Phco7g00031 291 Pfam Sigma-70, region 4 225 277 IPR007630 GO:0003700|GO:0006352|GO:0006355
Phco7g00031 291 NCBIfam sigma-70 family RNA polymerase sigma factor 181 279 IPR014284 GO:0003700|GO:0006352|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00031 Phco-Chr7 207903 210734 Transposed