Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03239 ATGGCTTTAGAGCAGGAATTGTCGCTGGGTCAGAATACGAATACGGATAGGAATCCGAATCCAGTTGACGGCGTGGATGTTCGGGGGGATGGTGGAGATGAGGGAGGGAAAGCGCCGAGACTGCCTCGGTGGACAAGGCAAGAAATTCTGGTTCTTATACAGGGAAAGAGAGACGCTGAGAACAAGTTCAGGAGGGGTCGAACGGCGGGATTGCCATTAGGGTCGGGTCAGGTGGAGCCCAAATGGGCATCAGTTTCTTCCTACTGCAGAAAGCACGGAGTCAACAGAGGTCCTGTTCAGTGCCGGAAAAGGTGGAGCAATTTGGCCGGAGACTACAAGAAGATCAAGGAATGGGAGTCTCAGATAAGGGAGGAGTCGGATTCCTTTTGGGTCATGAGAAACGATTTAAGGAGAGACAGGAAATTGCCCGGATTTTTTGACAAGGAGGTCTATGATATTCTCGATTCAGGCTCCCAAGCTCCGGCGTTGGCTCTCGCTCTTTCGTCGCCTCCATCAATCACAGTAACTGTCTGCAAGGACATGGACATAGACTCCAAAAGAGGGCCTGCCCCTGCCCCTGCCTCAGCCTCAGCCTCCGACCCTGCCCCTGCTGATCCTGATGAGCCTCATCTCTATGATAGTAATCGGAGCGTGCCTGTTGAGGATGGCTTGTTCTCAGATTTTGAACAAGATGAAGTCTCTGCCAGTCCTGAGAAAAAGGACATTTTTCCGCCCTCCAACAGGGATTTTCCTGCTCCCATTCCTATATCAGGTGTGACTAACGAGAAACGGACAACTCCAAATCCAGAAATGGGTTCTACCTCTCAAGGAGATCGGAAAAGGAAGCGGTTAGCAACTGATGGAGGGGAGGAGACTTTGCAAATTCATTTAATTGATGTCTTAGAAAGAAATGGCAAGATGCTAAGTGCTCAACTTGAAGCACAGAATATAAATTTCCAGTTGGATCGTGAGCAGCGGAAAGTCCATGGTAGTAATTTGGTTGCTGTGCTTGATAAGCTTGCAGATGCTCTAGGGAGAATCGCTGATAAATTATAG 1056 0.4924 MALEQELSLGQNTNTDRNPNPVDGVDVRGDGGDEGGKAPRLPRWTRQEILVLIQGKRDAENKFRRGRTAGLPLGSGQVEPKWASVSSYCRKHGVNRGPVQCRKRWSNLAGDYKKIKEWESQIREESDSFWVMRNDLRRDRKLPGFFDKEVYDILDSGSQAPALALALSSPPSITVTVCKDMDIDSKRGPAPAPASASASDPAPADPDEPHLYDSNRSVPVEDGLFSDFEQDEVSASPEKKDIFPPSNRDFPAPIPISGVTNEKRTTPNPEMGSTSQGDRKRKRLATDGGEETLQIHLIDVLERNGKMLSAQLEAQNINFQLDREQRKVHGSNLVAVLDKLADALGRIADKL 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03239 351 ProSiteProfiles Myb-like domain profile. 43 109 IPR001005 -
Phco6g03239 351 MobiDBLite consensus disorder prediction 1 42 - -
Phco6g03239 351 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 12 351 - -
Phco6g03239 351 MobiDBLite consensus disorder prediction 1 20 - -
Phco6g03239 351 MobiDBLite consensus disorder prediction 27 41 - -
Phco6g03239 351 Gene3D - 44 114 - -
Phco6g03239 351 MobiDBLite consensus disorder prediction 184 286 - -
Phco6g03239 351 MobiDBLite consensus disorder prediction 259 274 - -
Phco6g03239 351 Pfam Myb/SANT-like DNA-binding domain 43 132 IPR044822 -
Phco6g03239 351 CDD GT1 42 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03239 Phco-Chr6 52807772 52811502 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Phco6g03239 Myb_DNA-bind_4 8.7e-13 CL0123