Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03198 ATGCCGCACAAGCTTTTTATCTCACCAGATTCCTTTAAACAAACCCTAACACATAACATACCAAATCTCTCATCTCATATCAAAGCATCTTTAAGAGACTACCACCACCGTCCTGCGCATTTGGCACATGCTTCTCCTGATTACTTCGTCCGCCAGGGGAATACAACTTATCAAGACGATCTATTTTTGAGGAAGAGGACAAGGATGCGTCGGTGGCTTTGTTGCACTTGTCAGGTGGAAGAGTCTTACCCATCCAACGAAAATGAACACCTGAAAAGCCCAAGGAATTATGGAGACGGCAACCAAAAAGGCTCAAAGGTGTTAGCTCCTGTGAAGCCTGAAACACAAAAGGCACCCCCACCTATTGAAGCTCCTGCCCTATCGTTAGATGAGCTGAAGGAAAAGACTGACAACTTTGGTTCGAAGGCATTAATTGGTGAGGGATCGTACGGAAGGGTGTATTATGCAACCTTAAACAATGGAAAAGCAGTGGCTGTGAAAAAGCTTGATGTTTCATCTGAACCCGAATCAAATAACGAGTTTTTGACCCAGGTTTCCATGGTCTCAAGATTGAAGAATGATAATTTTGTTGAGTTGCATGGTTATTGTGTTGAAGGAAATCTTCGTGTACTTGCATATGAGTTTGCTACTATGGGCTCTCTTCATGACATATTGCACGGTAGAAAGGGAGTTCAAGGTGCACAACCAGGACCAACTCTTGATTGGATACAGCGAGTTCGAATCGCAGTTGACGCGGCAAGGGGATTGGAGTATTTACATGAAAAAGTTCAGCCACCGATTATACACAGGGATATCAGATCAAGTAATGTGCTGATCTTTGAAGAGTATAAGGCTAAGATAGCTGACTTTAACCTTTCTAATCAGGCCCCTGACATGGCTGCACGCCTCCATTCAACTCGTGTATTGGGAACTTTTGGGTATCATGCTCCAGAATATGCAATGACTGGGCAGTTGACTCAAAAAAGTGATGTCTATAGTTTTGGAGTTGTTCTTCTTGAGCTTCTTACAGGAAGAAAACCTGTTGACCACACCATGCCTCGAGGACAGCAGAGTCTTGTGACATGGGCTACTCCACGATTAAGTGAAGATAAAGTGAAGCAGTGCGTAGACCCAAAACTGAAGGGAGAATACCCCCCTAAAGGAGTTGCTAAGCTTGCAGCTGTTGCAGCACTGTGCGTGCAGTATGAAGCTGAGTTTAGGCCAAATATGAGCATTGTTGTTAAAGCACTCCAACCACTTCTGAAGACTCCTGCTCCTGCTCCAGAAAGTTGA 1293 0.4424 MPHKLFISPDSFKQTLTHNIPNLSSHIKASLRDYHHRPAHLAHASPDYFVRQGNTTYQDDLFLRKRTRMRRWLCCTCQVEESYPSNENEHLKSPRNYGDGNQKGSKVLAPVKPETQKAPPPIEAPALSLDELKEKTDNFGSKALIGEGSYGRVYYATLNNGKAVAVKKLDVSSEPESNNEFLTQVSMVSRLKNDNFVELHGYCVEGNLRVLAYEFATMGSLHDILHGRKGVQGAQPGPTLDWIQRVRIAVDAARGLEYLHEKVQPPIIHRDIRSSNVLIFEEYKAKIADFNLSNQAPDMAARLHSTRVLGTFGYHAPEYAMTGQLTQKSDVYSFGVVLLELLTGRKPVDHTMPRGQQSLVTWATPRLSEDKVKQCVDPKLKGEYPPKGVAKLAAVAALCVQYEAEFRPNMSIVVKALQPLLKTPAPAPES 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03198 430 Gene3D Transferase(Phosphotransferase) domain 1 217 425 - -
Phco6g03198 430 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 72 425 - -
Phco6g03198 430 Pfam Protein tyrosine and serine/threonine kinase 144 417 IPR001245 GO:0004672|GO:0006468
Phco6g03198 430 FunFam PTI1-like tyrosine-protein kinase 3 101 215 - -
Phco6g03198 430 SMART tyrkin_6 139 417 IPR020635 GO:0004713|GO:0006468
Phco6g03198 430 MobiDBLite consensus disorder prediction 84 122 - -
Phco6g03198 430 FunFam PTI1-like tyrosine-protein kinase 3 217 427 - -
Phco6g03198 430 SUPERFAMILY Protein kinase-like (PK-like) 119 417 IPR011009 -
Phco6g03198 430 ProSitePatterns Protein kinases ATP-binding region signature. 145 168 IPR017441 GO:0005524
Phco6g03198 430 ProSitePatterns Tyrosine protein kinases specific active-site signature. 267 279 IPR008266 GO:0004672|GO:0006468
Phco6g03198 430 ProSiteProfiles Protein kinase domain profile. 139 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g03198 430 Gene3D Phosphorylase Kinase; domain 1 112 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03198 Phco-Chr6 52538325 52544146 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Phco6g03198 PK_Tyr_Ser-Thr 4.4e-46 CL0016