LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Phco6g03192	ATGGCCATGAACTCCACCAAGTCCAACAACTTTAGCGCCACCCTCTTTCCTCTCTCGGGTTCCAACGCCGTTTCAAAGAGCGAAGCCTTAGCGGTGAAAGGAATGAGCCAACTGGGGTTGAACCAAAGGGTCGAAAGCCTGAGAAAATTCTCATTGGCCACGAAAAGAAGAGCAGTGATGTTTCATGGTAATGCCGGCGAAAAAGTGAAGGGCAAAGAGGTTCTGAGGGGTCAGTTTTCAGGTGTGTCACCAATTTCATTAGGTGATGGTGGCGACACTGAGAGGATCTTAAGAGCGAGTGAGATAGTAAGAGTGAAACTGGAGCATGCAGTCTGCAATGCTACTACTGAGGAGAATAATAAGAAAGAGAAGGAGATGGTGCAAGCCAAACTCCTCTCTGCCTCACCCTTCGCTTCTGAAAGTGATGCTGTTGGTGGCACTTCATCAACACAGCTGGCGATTATTGCACCACTCCAAAGGGGAAGTTTTCTGAACCATTTTGCTTATCCCTTCCCCAACATCGGTAGAAGTTCCCATTTCTCACCGTCACAGACAGACAGTGAGGTTGATAAAAGCATGACCCTCTGTGCAACTCCATTGAGTGTTTGTTTTCCCCACGAAAGCAATTATGGGAGGCAGAAGACGAGAAACAGCAACGTGGGTGGTGAAGCAGTCGAGGATGTTTGTTGCAGGGAGGAAGAGAGCGAATACGATGGTCGGATGCACAGCAATCCGCACAAGAAGAACGGGCCGTACACGTGCCCGAAGTGCGGGTGTGTGTTTGAGACGTCGCAAAGGTTTGCGGCGCACGTGAGTTCGAGGCACTACAAGTACGAGACGAAGAGTGAGAGGAAGAAGAGAATGATGGCGAAAATACGAAGGCGGAGTCTGCGTCTTGAATGGGAAAATGGTGCACTCACTGTTGTTGCTGACGATGCTCCCAGAGCCACTGCCTTTGGTTTTGCAGGAAACAATACCAACGTTGCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCTGAGATCAAGATTGAAACTGAGACTGGTGTGGGGCTTCAGCTTGCTCCTCCTCCCGGGTGGCCAAAAAGAACTGGTGCTAGACCAGAATCTGCAGGAGGTTTCAGAATAAAAATGGAGCCATTAGACAATTGA	1149	0.4978	MAMNSTKSNNFSATLFPLSGSNAVSKSEALAVKGMSQLGLNQRVESLRKFSLATKRRAVMFHGNAGEKVKGKEVLRGQFSGVSPISLGDGGDTERILRASEIVRVKLEHAVCNATTEENNKKEKEMVQAKLLSASPFASESDAVGGTSSTQLAIIAPLQRGSFLNHFAYPFPNIGRSSHFSPSQTDSEVDKSMTLCATPLSVCFPHESNYGRQKTRNSNVGGEAVEDVCCREEESEYDGRMHSNPHKKNGPYTCPKCGCVFETSQRFAAHVSSRHYKYETKSERKKRMMAKIRRRSLRLEWENGALTVVADDAPRATAFGFAGNNTNVAPPPPPPPPPAEIKIETETGVGLQLAPPPGWPKRTGARPESAGGFRIKMEPLDN	382

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Phco6g03192	382	ProSitePatterns	Zinc finger C2H2 type domain signature.	254	275	IPR013087	-
	Phco6g03192	382	MobiDBLite	consensus disorder prediction	350	382	-	-
	Phco6g03192	382	ProSiteProfiles	Zinc finger C2H2 type domain profile.	252	280	IPR013087	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Phco6g03192	Phco-Chr6	52496666	52497814	Tandem

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	C2H2	Phco6g03192		None	None	None