Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03114 ATGTGGCACAGCGTTAAAGAGGATCAAATTTCTGGTTTAAAATGTTTGTGTCTTTTGTCTGTTTCTCTCACTTTCTGCTTTTCTGACAACCTTTGTGGACTTCTCTTTCTCATTCTCTCTCTTCATCAAATCAACAACATCATCATAATTCAGAGCGCAATCATCGTCACAGAGAGAGGGACAAAGCAGAAGAAGAGAAAGAAAGAGATGGTGAACGTGGTGGAATTGCAGAAACAGCTGCAGAGGTGGCAGCAGACTGGGAATAATAATGTCAATGTCGATGCCAACGGAGAACTCATGTATGTCCAAGTCATGACTGACGAACAGTTGGAAACTCTCAGGAAACAAATTGCTGTTTATGGCACCATCTGTGATCAACTGATTGAGATGCACAGAACACTCTCAGCACAGCAGGATCTTGCAGGGGTTAGGTTGGGAAACCTGTACTGTGATCCATTGATGATATCTGGTGGACACAAAATAACATCCAGACAAAGGTGGACACCTACACCTGTGCAGCTTCAGATTCTTGAACGTATATTTGATCAGGGAAATGGAACTCCAAGCAAGGAAAAAATCAAGGAGATCACTGCTGAACTGGGCCAGCATGGCCAAATTTCTGAAACAAATGTGTACAATTGGTTTCAGAATAGGCGTGCTCGATCCAAAAGAAAACTGCAAAATGTGGCTCCTAGCAACACTGAATCAGAAGTGGACACTGAGGTTGATTCTAAGGATAAGAAGACAAAAGCTGAGGAGTTTCAGTCCCAACATAACATAACAGCTTCTGGAGGGGCTGAAAAGCTGTGCTTTCAGAACCCTCAAGTCTACTCTGACTTGCAGTACTTGAACCCTGATTCCAACAAACCATATTCCATGTTCCCATCAGATGGCAGTTTGAAATCCACAAGAAATTTGAGTCATGTGTCTGTTTTTAACGAGGTGCTGTCAAACTCAAGGAGTGAGTATGCAGGTGGAAAAATGGAAGTTGGTGGGACAGTGAGCTACAATTTATTCCACCAAACAGGAGACTGCAATCTGGGGGGTTGA 1050 0.4305 MWHSVKEDQISGLKCLCLLSVSLTFCFSDNLCGLLFLILSLHQINNIIIIQSAIIVTERGTKQKKRKKEMVNVVELQKQLQRWQQTGNNNVNVDANGELMYVQVMTDEQLETLRKQIAVYGTICDQLIEMHRTLSAQQDLAGVRLGNLYCDPLMISGGHKITSRQRWTPTPVQLQILERIFDQGNGTPSKEKIKEITAELGQHGQISETNVYNWFQNRRARSKRKLQNVAPSNTESEVDTEVDSKDKKTKAEEFQSQHNITASGGAEKLCFQNPQVYSDLQYLNPDSNKPYSMFPSDGSLKSTRNLSHVSVFNEVLSNSRSEYAGGKMEVGGTVSYNLFHQTGDCNLGG 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03114 349 MobiDBLite consensus disorder prediction 223 246 - -
Phco6g03114 349 Pfam Homeodomain 164 224 IPR001356 GO:0003677
Phco6g03114 349 SMART HOX_1 162 229 IPR001356 GO:0003677
Phco6g03114 349 ProSiteProfiles 'Homeobox' domain profile. 160 225 IPR001356 GO:0003677
Phco6g03114 349 SUPERFAMILY Homeodomain-like 163 226 IPR009057 -
Phco6g03114 349 Coils Coil 66 86 - -
Phco6g03114 349 CDD homeodomain 164 225 IPR001356 GO:0003677
Phco6g03114 349 PANTHER WUSCHEL-RELATED HOMEOBOX 13 82 338 IPR044559 GO:0003700
Phco6g03114 349 Gene3D - 166 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03114 Phco-Chr6 51998547 52000771 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Phco6g03114 Homeodomain 1.2e-18 CL0123