Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03074 ATGAGACGAAGTGTTTCGCTTCCTCTCTCAAATACAGTGATCCTCGACAAAACCCACGTAGAAATTATGGTTTTACCTTGCTTCCTTCCTTTGCTGCTTCTTTCTTTCTTTTCTTTTCATTCAAAACTCTTTTCATTCAAAACTCTTTCATTGAAACAGAGACACTCACAGAAACTCACTCACAGCAACTCACTCACAGCAACTCACTCAAATCTCATTTTCATTCTCATTCCCACTCTCAATCAATACTATAACACAAACACGCACATGTCAACCTCTGACGGCACAACTAACGGCGTCACTAACGCCTCAATCATTGACCCGCAGCGCCAGCAACCGCAGGCGTTGGCCGTCAAGAAGCCGCCATCCAAGGACCGACACAGCAAGGTCGACGGCCGCGGCCGCCGCATACGAATGCCCATAATATGCGCAGCGCGCGTCTTCCAGCTCACGCGCGAGCTAGGACACAAGTCCGACGGCCAAACCATCGAGTGGCTCCTCCGCCAGGCCGAGCCTTCCATCATCGCCGCCACCGGCACAGGCACCACGCCCGCCAGCTTCTCCTCCGTCTCCCTCTCTGTACGCGCCGCCAACTCCGCATCTCTCTCTTCCCCTTCCAGCGTCTCCGACCACAAGCCGCAGCTACTCGCTCCCACGCCGTTCATCCTCGGCAAGCGCATACGCACCGACAATGACAGTTCAAAGGACGACGCCGTCTCAGTGGGCCCCTCCCTCGTGGGCCCCTCAACCCCGTCCGGACTGTGGGCCCTCCCTACTCGCCCCGATTTCGGACAAATTTGGAGCTTCGCCGCGGCGGCTCCAGAAATGGTCGTGCACCCCCCCGCCGTGTCGGTGTCGCAGCAGCAGGTGTCGCTCTTTGCTCATCACCAACGTCAGCAGCAGCAGGCCATCGGAGAAGCGTCGGCGGCTAGGGTGGGGAATTACCTTCCGGGACATCTGAATTTGCTGGCTTCGTTGTCCGGCGGACATGGGAATTCTGGTCGGAGAGATGACGAGCATCGTTGA 1026 0.5673 MRRSVSLPLSNTVILDKTHVEIMVLPCFLPLLLLSFFSFHSKLFSFKTLSLKQRHSQKLTHSNSLTATHSNLIFILIPTLNQYYNTNTHMSTSDGTTNGVTNASIIDPQRQQPQALAVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSLSVRAANSASLSSPSSVSDHKPQLLAPTPFILGKRIRTDNDSSKDDAVSVGPSLVGPSTPSGLWALPTRPDFGQIWSFAAAAPEMVVHPPAVSVSQQQVSLFAHHQRQQQQAIGEASAARVGNYLPGHLNLLASLSGGHGNSGRRDDEHR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03074 341 MobiDBLite consensus disorder prediction 110 131 - -
Phco6g03074 341 Pfam TCP family transcription factor 123 214 IPR017887 -
Phco6g03074 341 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 97 313 IPR005333 GO:0003700
Phco6g03074 341 ProSiteProfiles TCP domain profile. 123 177 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03074 Phco-Chr6 51760131 51762626 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Phco6g03074 TCP 3.1e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g03074 6 51760131 51762626 Phco6g03074 6 51760131 51762626 ECH