Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g03028 ATGGCATTGCAGGAAGGTTATTGCTTGGCACACAGAGCCCTTACACATGTCTTCTTCGTCTTTTCATTTTCTCTCGTGATATTCCTCTTCTCTCTCTCTTTTGCCCCCTCTGGTTTCTGTTTGCGTGGGGAGCAAAAAGAAACACAAGAAAGTGAAGGTCTTTTTAACTCTACCAAGGGTTTGGATAAAGATCAAAGTGAACATAACATGGGTAGTTGTGGAAGAGAAGGAGCTGTGAGGCAGTATATAAGGTCAAAGGTTCCTCGCTTAAGGTGGACTCCCGAGCTGCACCGTTGCTTTGTTCACGCCATTGATAGCCTTGGAGGTCATCAAAAGGCTACTCCGAAGCTTGTTCTTCAGTTGATGGATGTTAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACAGAAGCATGAGGGGCGACTTGGGTAGACAAGGTAGGACACCCTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTTGGTGTTGAGTACTCATGTTCGAAACCCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAACAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAATGCAGCCTAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGCTGAGCACAAGGGAATAAAGGAGTTCTGCAAGGCTTCAACTTGGCAGATACAACCCCATTCCTCTCTGTTACCACATTTTCCCAACCTCACTTCATTCCCATGTCCTAACCAAAAATCAGATTTCCTCCAGGTAACAACATTAAATGAAGGAAAGAGCAGTGGAAAGGGAATTAATGTAGATGTGAACACTGAGACAGGTGAGGCAGAAGTTGAAGATGCAGGAGGGTATGAATTGTCATTGTCGCTTACAATGCCAAATCCTTCACCTCAGAGAAGTAATGGTTCATGTTCAGGCAGTGAGATCAGTGAGACAATCTCATCATACCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACTAGTTCATCCACTCTCAAAGAAACAATTAATTTGGACCTTTCTTTAGCTCTATGTGGCAATTGA 1143 0.4436 MALQEGYCLAHRALTHVFFVFSFSLVIFLFSLSFAPSGFCLRGEQKETQESEGLFNSTKGLDKDQSEHNMGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHNNLPPKRARIETRSSISESLQCSLRLCDAVPNPYCFYDYLQKPMAEHKGIKEFCKASTWQIQPHSSLLPHFPNLTSFPCPNQKSDFLQVTTLNEGKSSGKGINVDVNTETGEAEVEDAGGYELSLSLTMPNPSPQRSNGSCSGSEISETISSYPAAGFSNYKDCTSSSTLKETINLDLSLALCGN 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g03028 380 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 67 168 IPR046955 GO:0003700
Phco6g03028 380 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 144 IPR017930 -
Phco6g03028 380 MobiDBLite consensus disorder prediction 145 165 - -
Phco6g03028 380 NCBIfam myb-like DNA-binding domain, SHAQKYF class 88 141 IPR006447 GO:0003677
Phco6g03028 380 Gene3D - 87 143 - -
Phco6g03028 380 MobiDBLite consensus disorder prediction 51 73 - -
Phco6g03028 380 Pfam Myb-like DNA-binding domain 90 140 IPR001005 -
Phco6g03028 380 SUPERFAMILY Homeodomain-like 86 141 IPR009057 -
Phco6g03028 380 FunFam Myb family transcription factor 86 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g03028 Phco-Chr6 51383655 51387943 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Phco6g03028 Myb_DNA-binding 1.6e-05 CL0123