Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02987 ATGGGAAAGAAAGCTTTGAAACTTCCCTCTCTTTTCAAAACCAAAGAAGCACCAAGAAAGCATCATCACCTTCTTCACAGTCATCATCATTCATGGCAATTCATACCCTCTTGTGGCCACTCCAAGACTCTTTCTTTCCGAGGTGGCGATGATGACATCTTCAAGACAGTTAACTCCGTGTTCTTCGACCCTTCAGAGAGTGTCATCGAAACTCCCAAGTCATGGTTCACTACCTCATCTGAATCTGCCAGCATCTCAACTGAGTCAGAAGACTACTACTACTGTGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCAGGCGACACAAGCTCCATCTTGGAAAAGGCCAAGGCCAGTGGGTTTCCCTTTAAAGAAAGTGTGGTTCTTGCCATGGAGTCAGATGACCCTTATGAGGATTTCAAGAGATCAATGGAGGAGATGGTTGAGTCTCATGGAGTAAGGGATTGGGAGGGCTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGTAGAAACAATCACGGATTTATAGTGGGTGCTTTTGTCGATTTGCTCTTTAGTTTAGCAGCTTCTAATAATTCTAACTCTTGTTCTGATTCAACTGCATATTCTTCTGCTATTTCTTCTTTTTCTTCTTCTCCCTTGTGTGATGAGATTGTTGAGCATGGGACTGGGAATGATGATGCTGTAACATCTTAG 732 0.4399 MGKKALKLPSLFKTKEAPRKHHHLLHSHHHSWQFIPSCGHSKTLSFRGGDDDIFKTVNSVFFDPSESVIETPKSWFTTSSESASISTESEDYYYCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAMESDDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGFIVGAFVDLLFSLAASNNSNSCSDSTAYSSAISSFSSSPLCDEIVEHGTGNDDAVTS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02987 243 ProSiteProfiles OVATE domain profile. 139 198 IPR006458 -
Phco6g02987 243 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 24 200 IPR038933 GO:0045892
Phco6g02987 243 Pfam Transcriptional repressor, ovate 143 199 IPR006458 -
Phco6g02987 243 NCBIfam uncharacterized plant-specific domain TIGR01568 137 200 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02987 Phco-Chr6 51055930 51056661 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Phco6g02987 Ovate 8.2e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g02226 2 52940648 52941484 Phco6g02987 6 51055930 51056661 ECH
Phco6g00094 6 946226 946939 Phco6g02987 6 51055930 51056661 ECH
Phco6g02987 6 51055930 51056661 Phco6g02987 6 51055930 51056661 ECH