Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02923 ATGGCTGCACTTCATGTGTCTGGAGTGGTTTTGTTCGGATGGCTTTTACAAGTGGTATTGAGTGGTAGCTGTCCCTCCTTGATTAACTGCGGTGATCTCGGTAACATCAGTTTTCCTTTCACCGACACACGTCACCGAGACTGTGGCATATTGGTGATACATGGCTGTGATGACGACGAACCAGGGGCCCAAAAAACCATAAAAAACAACAATAAATGGTTTGATATTGTGAAGCTCGAGCAGTTGACGATTACCATCAAAGACGATGAACTCCGCGACTTTTTGCTACAGCGAAGTTGTGACACCTTCAACCACAACTATACTTTCACTGTCAGCTCGCCTTTGGCTAAGATTTCTCGTTTAAATCATTACGTAGACGTACTCAGATGTAACCACGCCCTCGGTGCTCCGCCAAACAATTCAGTTTCTAACTCTGCAATTTGCAGAAATGAAACACTGTATTCAATGGTGGACACCGACCCTTCTTCCAGCTACAGTCATCTCAAAGGATGTTCAATGGTTCAGCTTCCAACGAGCTCCGACATGCTGTTTGCGGATCTTGATCCCGATGACCCTTTCAAGCACGTAACTTACGAAATCAACATTGGAATAGAATTGTCTCAGAACTGTTTCAGGTGTCTGTATGTTAATGGCGGCCAATGTCGAGTTGACAACACCGGAATGTTTTACTGTGACCAAGGAAATAAATCAACAAAAATTCGTCTTATAGTGACAACAGTTGCATGTGTGGCTGGAGCACTAGGAGTTCTGATATTTGTGGGGTGGTTCATTAGAAGACGGTTTTACAAGAAAAACCCCAGCTACCAAATCATTGAGATGTTTCTGAACATCCACGGTCATCTTGCAGCCAAAAGATACAGTTATTCAGAGATAAAGAAGGCCACGAACTCCTTCAGAAACAAATTGGGTGAAGGAGGGTATGGTAGCGTGTACAAGGGCAAGTTAAACGATGGAAGCCTTGTGGCAGTGAAAGTCTTAAGCGACTCCAAAGGTAACGGTGAGGAATTCATCAATGAAGTTGCTAGCATCAGTCTTACTTCTCATGTTAACATTGTTAGTTTACTAGGATTCTGTCAGGAAGGTTCTAAAAGAGCTTTAATATATAAGTACATGCCTAATGGATCCCTTGAGAAGTTCATATATGAAGACAAGGATCCACACAAGCTTAGTCTTCAATTAAGCTGCAAAACCATCTACAATACTGCAATTGGCATTGCTCGAGGATTAGAGTATTTACACAGAGGATGCAATACTAAAATCTTGCATTTTGATATAAAGCCTCACAATATATTGATCGATGAGGATTTCTGTCCCAAAATTTCAGACTTTGGACTAGCTAAAATATGTCAGAAAAAGGAAAGTATTGTGTCCTTATTGGGAACTAGGGGAACTGCAGGATACATTGCTCCTGAGGTGTTCTCCAGAAATTTTGGAGTAGTCTCTCATAAATCTGATGTATATAGCTATGGAATGGTGGTTTTGGAAATGGTGGGGGCAAAGATGAATAATAATGATGAAGTTGAACGTTCAAGCGAAATATATTTTCCTAACTGGGTTTACAAGCGTCTTGAGCTGAATGAGGAACCTAGACTGCGAAGCATAAAAAGTGAAAGTGATAGAGAAATGATACGAAAGTTGATTATTGTGAGCTTATGGTGCATTCAGACAGACCCATCAAATAGGCCAGCAATGAGTAGAGTGGTAGATATGATGGAAGGAAGCTTGGAGGTCTTGCAAATACCACCAAAACCTTATCTCTCTTCACCTCCCAGATCCCCTCCTAGCTCCTCAGATCACACCACCACCTACACCTCTCACACTACTTATCCTTCCGAGTACTGA 1863 0.4187 MAALHVSGVVLFGWLLQVVLSGSCPSLINCGDLGNISFPFTDTRHRDCGILVIHGCDDDEPGAQKTIKNNNKWFDIVKLEQLTITIKDDELRDFLLQRSCDTFNHNYTFTVSSPLAKISRLNHYVDVLRCNHALGAPPNNSVSNSAICRNETLYSMVDTDPSSSYSHLKGCSMVQLPTSSDMLFADLDPDDPFKHVTYEINIGIELSQNCFRCLYVNGGQCRVDNTGMFYCDQGNKSTKIRLIVTTVACVAGALGVLIFVGWFIRRRFYKKNPSYQIIEMFLNIHGHLAAKRYSYSEIKKATNSFRNKLGEGGYGSVYKGKLNDGSLVAVKVLSDSKGNGEEFINEVASISLTSHVNIVSLLGFCQEGSKRALIYKYMPNGSLEKFIYEDKDPHKLSLQLSCKTIYNTAIGIARGLEYLHRGCNTKILHFDIKPHNILIDEDFCPKISDFGLAKICQKKESIVSLLGTRGTAGYIAPEVFSRNFGVVSHKSDVYSYGMVVLEMVGAKMNNNDEVERSSEIYFPNWVYKRLELNEEPRLRSIKSESDREMIRKLIIVSLWCIQTDPSNRPAMSRVVDMMEGSLEVLQIPPKPYLSSPPRSPPSSSDHTTTYTSHTTYPSEY 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02923 620 PANTHER RUST RESISTANCE KINASE LR10-RELATED 276 600 IPR045874 GO:0004672
Phco6g02923 620 Gene3D Transferase(Phosphotransferase) domain 1 378 586 - -
Phco6g02923 620 FunFam serine/threonine-protein kinase PBS1-like 279 377 - -
Phco6g02923 620 Pfam Protein kinase domain 307 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02923 620 Gene3D Phosphorylase Kinase; domain 1 282 377 - -
Phco6g02923 620 ProSiteProfiles Protein kinase domain profile. 303 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02923 620 MobiDBLite consensus disorder prediction 599 620 - -
Phco6g02923 620 MobiDBLite consensus disorder prediction 588 620 - -
Phco6g02923 620 SUPERFAMILY Protein kinase-like (PK-like) 284 578 IPR011009 -
Phco6g02923 620 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
Phco6g02923 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Phco6g02923 620 FunFam PR5-like receptor kinase 378 590 - -
Phco6g02923 620 SMART serkin_6 303 578 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02923 Phco-Chr6 50330852 50333397 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco6g02923 Pkinase 1.5e-45 CL0016