Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02922 ATGGTCCGCGTTCTTCTTTTCAAATCACTAATAGTATATTTCTCACAGCTTCTGCTGATTGTTTCAGCTCATCAGACCGGAAAGTGTCCACCATCTCTTGACTGTGGACTTCTTGGCCAGATTCAGTTTCCTTTCACAACCACTGAGCAACCACACTGCGGCTTATTGGCTATACATGGCTGTCAACATGATCCTTCCGCTCCCAAAACTCTCCAACTAGGCACCTCGACAACATCAACCTCGTACTCTGTTCTAAAGGTAGAACCTCGTACCATAGTCTTCGCAGATGATGAACAAGAACGTTATTTGCGAAACAAAAGTTGCAAAGCTTTCAGCAAGAATGTTACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCCGCATCAAATATAATATCTCTATCTTCAGATGCAATCACTCCCTCAAACCCTCCCTTCCCAACTATTTTCATAATTATCCAAACTGTTCTCCTGAGTACGACATCTTCTATGCCCATCCAAATACACTGAGTTATACGGGTTTCCAGTGGCCCAGCTCTTTAGCACCATGTTCAGCCATTCAGCTTCCTCTTGAAGGAGTTCCTTCCGAGGACCCCTTTCAATTTCTAACCGGTAATATCGTTGTTGAAGTACAGTTATCTCATGAATGTGAAAGGTGTCTTGATGGAAAAGGACAATGTTTACTTGACACTAAAGGAGAATTCAATTGCACCACAGCATCCGCAGGGAGTAGAAGCTGGGTAGTGAAAATGGTACTGGCACTCGCATTAGTTGTTACAGTTGCTTTATTGCTAGCGATATTCAAGATCTACTATACGAGACTGCAGAAGCAAAATTCAGCCAATCAACGGATTGAGGTCTTTCTGAAAAAACACGGAGCCCTTCAGATTAAGAGGTATGGTTATTCTGAGATAAAGAAAGTGACCAACTGTTTCAGAAACAAACTAGGCCAAGGAGGATTCGGTAGTGTATACAAGGGAAAATTGCAGGATGGACCTTATGTTGCAGTGAAGATCCTAAACGAATTAAAAGATGACGGAGAGGAATTCATTAATGAAGTTGCTAGCATTAGCAGAACTTCTCATATTAACATTGTTACGCTTTTGGGGTTCTGTTGCGATGGTTCTAAACGAGCTTTGGTTTATGAGTTTATGTCCAATGGATCACTTGAAAAATTTATCTATGAAGAAAAAGCTCTAATGACAGATCATCAATTGGACTGTCAAATGTTTTATCATATTGTAATTGGTGTTGCTAGAGGATTAGAATACTTGCATAAAGGCTGCAATACTAGAATTCTACACTTTGACATTAAACCTCATAACATTCTGTTGGATGAGAATTTCAATCCCAAGATTTCAGATTTTGGTCTAGCAAAAATTTGCTCAAGAAAAGAAAGTATTGTTTCAATATTTGGTGTAAGAGGAACAGCAGGCTATATTGCTCCAGAAGTTTTTTCCAGAAATTTTGGTGTAGTATCACATAAATCAGATATTTACAGTTATGGAATGATGATCTTAGAACTGATTGGAGGAAGAAAGAACACTATGACCAGGCCAAACCCCTCAAGTGAAATTTACTTTCCCGATTGGATATACAATCGTCTTGAATCAAACCAGGAACTTGGTTTACAAAACATGAGAAATATAAGTGATCAAAAAATGATAAGAAAGATGGCAATTGTGGGCTTATGGTGCATACAAACTCATCCTTCAACCCGACCTGCCATAAGTAGAGTGTTGGAAATGCTAGAAAGCAAAGTTGAGTTATTGCAAATTCCACCTAAACCTTTACTGTCTTCTCCTCCAACCTCTCCGGTTTATTTATCAAGTGAGGCATTGTAA 1842 0.3936 MVRVLLFKSLIVYFSQLLLIVSAHQTGKCPPSLDCGLLGQIQFPFTTTEQPHCGLLAIHGCQHDPSAPKTLQLGTSTTSTSYSVLKVEPRTIVFADDEQERYLRNKSCKAFSKNVTLPHTSPLASFRIKYNISIFRCNHSLKPSLPNYFHNYPNCSPEYDIFYAHPNTLSYTGFQWPSSLAPCSAIQLPLEGVPSEDPFQFLTGNIVVEVQLSHECERCLDGKGQCLLDTKGEFNCTTASAGSRSWVVKMVLALALVVTVALLLAIFKIYYTRLQKQNSANQRIEVFLKKHGALQIKRYGYSEIKKVTNCFRNKLGQGGFGSVYKGKLQDGPYVAVKILNELKDDGEEFINEVASISRTSHINIVTLLGFCCDGSKRALVYEFMSNGSLEKFIYEEKALMTDHQLDCQMFYHIVIGVARGLEYLHKGCNTRILHFDIKPHNILLDENFNPKISDFGLAKICSRKESIVSIFGVRGTAGYIAPEVFSRNFGVVSHKSDIYSYGMMILELIGGRKNTMTRPNPSSEIYFPDWIYNRLESNQELGLQNMRNISDQKMIRKMAIVGLWCIQTHPSTRPAISRVLEMLESKVELLQIPPKPLLSSPPTSPVYLSSEAL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02922 613 Pfam Protein kinase domain 313 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02922 613 FunFam S-receptor-like serine/threonine-protein kinase 275 383 - -
Phco6g02922 613 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Phco6g02922 613 FunFam PR5-like receptor kinase 384 595 - -
Phco6g02922 613 PANTHER RUST RESISTANCE KINASE LR10-RELATED 281 600 IPR045874 GO:0004672
Phco6g02922 613 Gene3D Transferase(Phosphotransferase) domain 1 384 597 - -
Phco6g02922 613 SMART serkin_6 309 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02922 613 ProSiteProfiles Protein kinase domain profile. 309 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02922 613 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Phco6g02922 613 Gene3D Phosphorylase Kinase; domain 1 282 383 - -
Phco6g02922 613 SUPERFAMILY Protein kinase-like (PK-like) 291 584 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02922 Phco-Chr6 50327771 50330468 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco6g02922 Pkinase 1.7e-45 CL0016