Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02921 ATGACAGATGACGATAAGTCTTCTTTCACAGCATGTAAAGAGGTCCAGCTTCCAAGTAAAGACGTGCCTGACGCCACTGACCCATTTAGTTTCATAACTGGGGATGTCACTATTAAAGTACAATTAATAGAACAATGTTCAGATTGCTACTATCGCCAAGGAGGGCAGTGTCTACTTGACAGCAGAGAGAAATTTTGTTGTGTCAACCGTTACGAGAAAACCAGAAAGCATATGTTGAAGGTGGCAACAGCTTCGACCGTGGTGGCTGCTGTACTTGTAGTGCTGGTGGTCTTGGTTTGGTGCTTTAGGACAAAGATCTTTTATCCTTTGTTTTGGAGGGAAAATCCAACTGATGGCATCATTGAGGACATTTTGAAGGAACATGGACCCCTTCCCACAGCCAGATTTGATGCAGTGTTGAACCGTGGTTTTGTGATTTTAGAAGATATTAGCAATTTAGGGAAGACAGTAGATGAATTGGCCTTGTTGTTTGTGGCACTTCTCTTGGCGGCTGGGGACCAAGGAAAGTGTCCACCTTTATTTCATTGTGGATATCTTGGCAATATCACTTTTCCTTTTACTATAACTGAACGCCAAGACTGTGGCTTCTTGTCCATACGAAATTGTGATGATCCTGATCCACGTAAGATCAAATTTCTCCAATTACCACCAAATGGGAAGTTGTTTCAAGTTATAACCATAGCTCAGCTTCTGAGTAGCCCTACTACTCATTTCTCAACTTTGCAATTTAGAGACGAACATTTCTACGACCTTCTGCAGAACCGAAATTGTAAAGCTTTCAGAAACAATTATACACTTCCTCATATTTCTGACTTTGCTGCTTTTAGATTGGTAGACAACACAACTCTATTCTTGTGCAACCAGACCCTCAATGTCAACCCTTCCACAAATATAAATATCAGCAAGTATAAGTGCGATGACTACGATATCTACTACAATCTCACAGATGACGATAAGTCTTCTTTAACAGCATGCGAAAAGGTCCAGCTTCCAATTAAAGACGTGCCTGACGCCAGTGACCCATTTACTTTCGTAACTGGGGATGTCAGTATTGAAGTAGAATTAGCAGATAATTGTTCAGATTGCTACTATCGCCAAGGAGGGCAGTGTCAACTTGACAGCAGAGAAAATTTTTGTTGTGCCAAAAGTTACGCTTCGACCGTGGTGGCTGCTGTACTTGTAGTGCTGGTGGTCTTGGTTTGGTGCTTTAGGACAAAGATCTTTTATCCTTTGTTTATGTGGGAAAATCCAACTGATGGCATCATTGAGGACATTTTGAAGGAACATGGACCCCTTCCCACGGCCAGGTTCAGCTATTTAGAGGTTAAGAAAATGACAAACTCTTTCAGAAACAAATTAGGCCAAGGGGGATTCGGTAGCGTATACAAAGGAAAATTACATGATGGAAGGGTTGTTGCAGTGAAAATCTTAAATATATCTAAAGGCAATGGAGAAGAATTCATTAATGAAGTTGTGAGTATAAGTAGGACTTCACATGTTAATATCATTAGACTTTTAGGATTTTGTTTTGACAATACTCACCGGGCTTTAATATACGAGTATATGCCTAATGGATCTCTTGACAAGTTTATCTTTGAAGAGAAAAATGCATTAAAGGATGTTCACAAACTGGATTGGAAAATATTGAATGATATTGCAATTGGCATTGCTAGTGGATTACACTACTTATACAGTGGTTGCAACTCTAGAATTTTACATTTTGACATAAAACCTCACAACATATTACTGGACGAGGATTTTTGTCCAAAAATTGCAGATTTTGGACTTGCAAAAATATGTCAAAGAAAAGAAAGTATGGTATCCTTATTTGGTGCGAGAGGAACTGCAGGCTATATTGCTCCAGAAGTTTTTTTCAGAAACTTTGGTGTTGTGTCACATAAGTCAGATGTTTATAGTTATGGAATGATGGTCTTAGAAATGGTTGGAAGAAGAAAGAATATTAAGACAAAAGTGGATCGGTCGAGTGAAATATATTTTCCTCATTGGATTTACAATCGTCTTGAATCAAATCTAGAGCTTAGTTTAGAAAATGTAAAAAATGAAAGTGAAAACCAAATGGTGAGAAAGATGACAATAGTAGGCTTGTGGTGCATACAAACTCAACCTTCAACTCCACCAACCATAAATAAAGTGGTGGAAATGTTAGAAAGTAAAGTTGATTTATTGCAAATTCCACCTAAACCAATTCTGTCTTCTCCTTCAACATCTCCTGTCAATTTGTCATATCATGAAAGTTTTAGTTTGTAA 2289 0.384 MTDDDKSSFTACKEVQLPSKDVPDATDPFSFITGDVTIKVQLIEQCSDCYYRQGGQCLLDSREKFCCVNRYEKTRKHMLKVATASTVVAAVLVVLVVLVWCFRTKIFYPLFWRENPTDGIIEDILKEHGPLPTARFDAVLNRGFVILEDISNLGKTVDELALLFVALLLAAGDQGKCPPLFHCGYLGNITFPFTITERQDCGFLSIRNCDDPDPRKIKFLQLPPNGKLFQVITIAQLLSSPTTHFSTLQFRDEHFYDLLQNRNCKAFRNNYTLPHISDFAAFRLVDNTTLFLCNQTLNVNPSTNINISKYKCDDYDIYYNLTDDDKSSLTACEKVQLPIKDVPDASDPFTFVTGDVSIEVELADNCSDCYYRQGGQCQLDSRENFCCAKSYASTVVAAVLVVLVVLVWCFRTKIFYPLFMWENPTDGIIEDILKEHGPLPTARFSYLEVKKMTNSFRNKLGQGGFGSVYKGKLHDGRVVAVKILNISKGNGEEFINEVVSISRTSHVNIIRLLGFCFDNTHRALIYEYMPNGSLDKFIFEEKNALKDVHKLDWKILNDIAIGIASGLHYLYSGCNSRILHFDIKPHNILLDEDFCPKIADFGLAKICQRKESMVSLFGARGTAGYIAPEVFFRNFGVVSHKSDVYSYGMMVLEMVGRRKNIKTKVDRSSEIYFPHWIYNRLESNLELSLENVKNESENQMVRKMTIVGLWCIQTQPSTPPTINKVVEMLESKVDLLQIPPKPILSSPSTSPVNLSYHESFSL 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02921 762 ProSiteProfiles Protein kinase domain profile. 454 733 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02921 762 Gene3D Phosphorylase Kinase; domain 1 433 528 - -
Phco6g02921 762 SUPERFAMILY Protein kinase-like (PK-like) 436 730 IPR011009 -
Phco6g02921 762 FunFam PR5-like receptor kinase 529 741 - -
Phco6g02921 762 ProSitePatterns Protein kinases ATP-binding region signature. 460 482 IPR017441 GO:0005524
Phco6g02921 762 Coils Coil 678 698 - -
Phco6g02921 762 Gene3D Transferase(Phosphotransferase) domain 1 529 744 - -
Phco6g02921 762 FunFam serine/threonine-protein kinase PBS1-like 430 528 - -
Phco6g02921 762 ProSitePatterns Serine/Threonine protein kinases active-site signature. 578 590 IPR008271 GO:0004672|GO:0006468
Phco6g02921 762 Pfam Protein kinase domain 458 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02921 762 SMART serkin_6 454 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02921 762 PANTHER RUST RESISTANCE KINASE LR10-RELATED 430 747 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02921 Phco-Chr6 50311322 50318776 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Phco6g02921 Pkinase 7.7e-45 CL0016