Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02916 ATGTATCTTGTTTATGTAATTCTTTTGTTTTGGCAACTGTTGCTTCTGTCAGCTGGGAATGCAAATGGACACAGTTCTGGTTGTCCAGACTCATTTGATTGCGGAAGTTTGGGGACAATTTCCTTTCCCTTCACCACCTCTGAACACCAGAATTGTGGCGTTTTGGCAATCCATGGCTGTAATAATCGTAACCAAACAGCACCGAAGCATGTCCAGTTGAGGAGTGGAGGAAAATTTTTACAAGTTACAAATATTGTTCGTTGGAGTAGCCCTGGTGTTTCCATTATAGATGAGGATTTCGGCAAGCTTCTAGTAAACTCTAATTGTGATGCCTTGAGCTATAATATCACCGTCCCTCCCTCCTCCCTTTTCGGTGTTTTTTATCTGGAAAACAACATAACCGCCTTCAATTGCAGCCGCGATAAAGACCTTAGCCATTCAAATGATTTCATCAACTACACTGGATGTCATCCCTTTGATTTTTACTTTGCCCCTTCCTCCTCTGCCCTCGCCTACCTAGGATCTTTAGCCTCCTCATGTTCAAAGGTTGAACTTTCCGTCAGACAAGATTCCCTGTTCTTCAAAGACCCATTTGGATTTTTAACTCCTCAAATCACCTTTAAGTTCCAGTTTTCAAATGACTGTCAGCAGTGTCATCGAAGAGGGGGCAATTGCCGACCAGACAGGAACGGAAATCCACATTGCGCGGTGAGGAAAAGTGGATTTTCGACTCGGAAGCTTGCTTTGATGCTAGGAATCGGTTTTGGACCATGGGTCATATTTGGGTTGTTCCTCACGCTACGCTACTGCAGACAGAAGTATGTTGAATCGAGAAACACTCGTTCTGATTCCTTCCAAAATTCAGACACAGAGAGTGAAAGGATCTTCTTTGGGGTACCCGTGTTCTCCTATAAGGAACTTCAAGAAGCAACCAACAATTTTGACCCCACTAGAAAGCTCGGAGATGGAGGCTTTGGCATTGTTTACTACGGGACACTGAGAGATGGAAGGGAAGTTGCAATCAAACATCTATTTGAGCACAATTACAAGAGAGTGGAACAGTTGATGAATGAAATTGAGATCCTTACTCGCTTGCGCCACAGAAATCTTGTGTCCCTTTTTGGCTGCACTTCTCGTCACGGCCACGAGCTATTGCTTGTGTATGAATACATTCCAAATGGCACAGTTGCTAGCCATCTCCATGGTGAATTAGCAAGAGTTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCCGTAGACACTGCTACTGCGTTGTCCTATCTCCATGCTTCTAACATCATTCACCGTGATGTGAAAACCAATAACGTTCTGCTTGACATTAATTTTTCCGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGCTCCCCAATGATGTAAGTCACGTGTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGATCCTGAATATTTTCAATGCTATAGGCTCACTGATAAGAGTGATGTGTATAGCTTTGGTGTTGTGCTGATGGAGCTAATATCTTCCATGCCAGCAGTTGATGCAGCCAGGGAAAGGGATGAAGTTAACTTAGCAAATCTTTGCATGAAAAAGATTCAAAAGGGAAAGCTTAGTGAGCTTGTAGACCCATCCTTTGGGTTTGAGTCAGACCAAGTGGTTAAAAGGATGGTGACTTCAGTGGCAGAATTGGCCTTTCGGTGTGTGCAAGGAGACAATGAATTAAGGCCTTCTATGGACCAAGTTCTGGAAGCCCTCAAGAAAATCCAAAGTGGGAGTTATGAATATGAGAATCTAGAGAAAGGAGATGATGATGGTAATGTTATCCCGTCTACATCCAGCGAAGAAGTGCAACCACCACCATCGGCTTCACGGAATTCGGGTCAAATTGGAATTTTAATGAATAATAAGCTATCTTCGCCAAGGTCCTTCACTGAGAAATGGGAAAGTGAATCCACCACGCCCAGTGTCAGTGAATTTCAAAGAGACAAGGACTGTGGAAAAAAAAGAGCAGAGAACAGAGTGAGGAAGCGTCCACAAATAACTCAATACATGGCTGCATTGCAGAAGTTCAAACTCTTCGCAACGCCCTGTGGAGTGGGGCAAAGCCCCACCCAAAGCCCAAGGACGAGCCCGTTGGTTCAGTTCCGGCGGCCAAAAACATCCCTGCGAACTCTTCTTAGCCTGAACCGGTCACCTCGGCAAGCCGTTGAGAAGGATCCCATGCGGAGACACTCACTGAAGGCCCTCTTTGTGTCCTCGCCGCCACGAGAGGAGCTCCTGCACGATCACGAAAAAACTCCAATGTTGGCTTCCGTTGCGGTTCCGCATTCTTGGAGTAACGAACCCGGTTCAACCAACTCGCCTTGGACCGGTTTTCGTTGCAGGTCGTTGTTGAAAAGGAAATACTGGCGCCCTCTCCTCCTCACGATTCCAGAATGA 2442 0.4554 MYLVYVILLFWQLLLLSAGNANGHSSGCPDSFDCGSLGTISFPFTTSEHQNCGVLAIHGCNNRNQTAPKHVQLRSGGKFLQVTNIVRWSSPGVSIIDEDFGKLLVNSNCDALSYNITVPPSSLFGVFYLENNITAFNCSRDKDLSHSNDFINYTGCHPFDFYFAPSSSALAYLGSLASSCSKVELSVRQDSLFFKDPFGFLTPQITFKFQFSNDCQQCHRRGGNCRPDRNGNPHCAVRKSGFSTRKLALMLGIGFGPWVIFGLFLTLRYCRQKYVESRNTRSDSFQNSDTESERIFFGVPVFSYKELQEATNNFDPTRKLGDGGFGIVYYGTLRDGREVAIKHLFEHNYKRVEQLMNEIEILTRLRHRNLVSLFGCTSRHGHELLLVYEYIPNGTVASHLHGELARVGLLTWPIRMQIAVDTATALSYLHASNIIHRDVKTNNVLLDINFSVKVADFGLSRLLPNDVSHVSTAPQGSPGYLDPEYFQCYRLTDKSDVYSFGVVLMELISSMPAVDAARERDEVNLANLCMKKIQKGKLSELVDPSFGFESDQVVKRMVTSVAELAFRCVQGDNELRPSMDQVLEALKKIQSGSYEYENLEKGDDDGNVIPSTSSEEVQPPPSASRNSGQIGILMNNKLSSPRSFTEKWESESTTPSVSEFQRDKDCGKKRAENRVRKRPQITQYMAALQKFKLFATPCGVGQSPTQSPRTSPLVQFRRPKTSLRTLLSLNRSPRQAVEKDPMRRHSLKALFVSSPPREELLHDHEKTPMLASVAVPHSWSNEPGSTNSPWTGFRCRSLLKRKYWRPLLLTIPE 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02916 813 Gene3D Transferase(Phosphotransferase) domain 1 391 600 - -
Phco6g02916 813 Gene3D Phosphorylase Kinase; domain 1 285 390 - -
Phco6g02916 813 MobiDBLite consensus disorder prediction 597 674 - -
Phco6g02916 813 SMART serkin_6 314 586 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02916 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Phco6g02916 813 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 8 652 IPR044652 GO:0004672
Phco6g02916 813 FunFam Wall-associated receptor kinase-like 20 391 598 - -
Phco6g02916 813 SUPERFAMILY Protein kinase-like (PK-like) 297 589 IPR011009 -
Phco6g02916 813 MobiDBLite consensus disorder prediction 607 660 - -
Phco6g02916 813 Pfam Protein tyrosine and serine/threonine kinase 317 586 IPR001245 GO:0004672|GO:0006468
Phco6g02916 813 ProSitePatterns Protein kinases ATP-binding region signature. 320 342 IPR017441 GO:0005524
Phco6g02916 813 ProSiteProfiles Protein kinase domain profile. 314 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02916 Phco-Chr6 50276755 50280893 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco6g02916 PK_Tyr_Ser-Thr 2.8e-46 CL0016