Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02915 ATGTTTTCTGTTTACATGTTCATTATGGTTTTCTTTGTGTGGGTTGGGAATGGAAATGGGAACAGGGCTGATTGTCCATTCTGGTTTGATTGTGGAAACCATGGGAAGTTCGGTTACCCTTTCACCACGGTACAACGCCAAGACTGTGGCATATGGCCAGTCCATGGTTGTGATGATCAGAATTCAAATTCAGGGCAAGGTGTGACGTTAAAGATTGGATCAAGCTGGATTAGGGTTAGAAACTTTGAGATGCAAATGCTTGTTACTGTTGTCTACTTCATTGATGATCATCTCAAGAATCTCCTGCAATCCGATAGTTGTGAGACATTCAGCCACAATATTTCACTCCCTCCTAGCTCTCCCTTAGGTTACTTTACTATCAACAACAACATAACCCTTTACAAGTGTAACCGCACCCTCCAAGTTAAGACCCCCAAAACATTCCTCAGAAATACAAGCTGTGACTATGACATCTTCATGGGGCCTCCACACTCTGATGATGAGTCTCAGAACTCTCTGGCTTCCTGTTCAATGGTTCAGCTTCCCGCCAATGGCTATGCAGTCTCTGCAAATCCGTTTGCATTCTTAACTGCTGACATTCCCTTGCTGTTCCATCCATCAGATGAGTGCATCCGGTGTTTGGATGCCAGAAGCCATTGTCACCTCGACAACCAACGAAAACTTCATTGCGCCCCAAGGAAGAACAAAAGTCCAGCTTGGAAGCTAGGATTAATATTAGGTATAGGTGCTGGACTATGCAATGCAGTAACATTGGTGTTGATCCTCACATTACGGCGCTGCAAATGGAAATACGGTGGTGCAGTAGCTCGATTCCGATCAAGAAACACTGGTGCTGATCCTCACGACAATCCCGACATGATAACAGATAGGATCTTCTTTGGAGTGCCCGTCTTCTCTTATAAGGAGCTTCAAGAAGCAACTAACAATTTTGACCGCACCAGAAAGCTAGGGGAGGGAGGATTTGGAAGCGTTTACTATGGTACGCTCGAAGATGGACGGGAAGTTGCAGTGAAATTCTTGTTCGAGCACAACTACAGGAGAGTGCAACAATTTTTGAACGAAATTGAGATTCTCACTCAGTTGCGACACAGGAACCTCGTCTCCCTCTACGGTTGCACTTCGCGTCACAGCCGTGAGTTACTGCTCGTGTACGAATACGTCCCAAACGGCACTCTTGCTTACCATCTCAACGGAAGGGACAAGTTGCTGACGTGGCCAATTCGGATGCAAATTGCGGTGGAGACAGCCACTGCGTTGGCTTATCTCCACGCTTCCGACATCATTCACCGTGACGTGAAAAGCAGCAACATTCTACTTGACACAAATTTTTTGGTTAAGGTGGCCGATTTTGGTCTTTCGAGGTTGCTTCCGAGCGATGCAAGCCACGTGTCAACCGCTCCGCAGGGGACTCCGGGGTACCTTGACCCTGAGTATTTCCAGCACTACCAGCTGACGGACAAGAGTGATGTGTTTAGCTTTGGGGTTGTGGTTGTTGAGCTGATATCGTCGTTGCCTGCGGTTGATCCCGGCAGGAAAAGTGATGAGATAAACTTGGCTAGTGTTGCCATAAAGAAGATTCAAAATGGGAAACTCAGTGAGCTGGTGTGCCAATCACTTGGTTTTGAGTCGGACGAAGAAGTGAAAAGGATGGTGACTTCAGTGGCGGAATTGGCCTTCCTGTGTGTGCAAGGAGACCGGCAATTAAGACCTTCCATGGATGAAGTCCTGCGAGCACTGCAGAAAATTCAAACTGGGATTTGA 1782 0.4691 MFSVYMFIMVFFVWVGNGNGNRADCPFWFDCGNHGKFGYPFTTVQRQDCGIWPVHGCDDQNSNSGQGVTLKIGSSWIRVRNFEMQMLVTVVYFIDDHLKNLLQSDSCETFSHNISLPPSSPLGYFTINNNITLYKCNRTLQVKTPKTFLRNTSCDYDIFMGPPHSDDESQNSLASCSMVQLPANGYAVSANPFAFLTADIPLLFHPSDECIRCLDARSHCHLDNQRKLHCAPRKNKSPAWKLGLILGIGAGLCNAVTLVLILTLRRCKWKYGGAVARFRSRNTGADPHDNPDMITDRIFFGVPVFSYKELQEATNNFDRTRKLGEGGFGSVYYGTLEDGREVAVKFLFEHNYRRVQQFLNEIEILTQLRHRNLVSLYGCTSRHSRELLLVYEYVPNGTLAYHLNGRDKLLTWPIRMQIAVETATALAYLHASDIIHRDVKSSNILLDTNFLVKVADFGLSRLLPSDASHVSTAPQGTPGYLDPEYFQHYQLTDKSDVFSFGVVVVELISSLPAVDPGRKSDEINLASVAIKKIQNGKLSELVCQSLGFESDEEVKRMVTSVAELAFLCVQGDRQLRPSMDEVLRALQKIQTGI 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02915 593 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 298 393 - -
Phco6g02915 593 FunFam Wall-associated receptor kinase-like 20 394 593 - -
Phco6g02915 593 ProSiteProfiles Protein kinase domain profile. 317 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02915 593 ProSitePatterns Serine/Threonine protein kinases active-site signature. 434 446 IPR008271 GO:0004672|GO:0006468
Phco6g02915 593 SMART serkin_6 317 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02915 593 Pfam Protein tyrosine and serine/threonine kinase 320 585 IPR001245 GO:0004672|GO:0006468
Phco6g02915 593 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 591 IPR044652 GO:0004672
Phco6g02915 593 ProSitePatterns Protein kinases ATP-binding region signature. 323 345 IPR017441 GO:0005524
Phco6g02915 593 SUPERFAMILY Protein kinase-like (PK-like) 298 589 IPR011009 -
Phco6g02915 593 Gene3D Phosphorylase Kinase; domain 1 294 393 - -
Phco6g02915 593 CDD STKc_IRAK 323 589 - -
Phco6g02915 593 Gene3D Transferase(Phosphotransferase) domain 1 394 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02915 Phco-Chr6 50270376 50272555 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco6g02915 PK_Tyr_Ser-Thr 3.7e-50 CL0016