Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02914 ATGCATTCAATGCATTTATTGTTTTCCGTTCCAAAACCTTTCTCTTATTTCATATTTCATACACATTTTCTGGGTTTTGTTTTGAAATCACTAATAGTATATTTCTCACAGCTTCTGCTGATTGTTTCAGCTCATCAGACCGGAAAGTGTCCACCATCTCTTGAGTGTGGACTTCTTGGCCAGATTCAGTTTCCTTTCACAACCACTGAGCAACCACACTGCGGCTTATTGGCTATACATGGCTGTCAACATGATCCTTCCGCTCCCAAAACTCTCCAACTAGGCACCTCGACAACATCAACCTCGTACTCTGTTCTAAAGGTAGAACCTCGTACCATAATCATCGCAGATGATGAACAAGAACGTTATTTGCGAAACAAAAGTTGCAAAGCTTTCAGCAAGAATGTTACTCTTCCTCACACCTCTCCTTTAGCTTCTTTCCGCATCAAATATAATATCTCTATCTTCAGATGCAATCACTCCCTCAAACCCTCCCTTCCCAACTATTTTCATAATTATCCAAACTGTTCTCCTGAGTACGACATCTTCTATGCCCATCCAAATACACTGAGTTATACGGGTTTCCAGTGGCCCAGCTCTTTAGCACCATGTTCAGCCATTCAGCTTCCTCTTGAAGGAGTTCCTTCCGAGGACCCCTTTCAATTTCTAACCGGTAATATCGTTGTTGAAGTACAGTTATCTCATGAATGTGAAAGGTGTCTTGATGGAAAAGGACAATGTTTACTTGACACTAAAGGAGAATTCAATTGCACCACAGAGCCTAGGAATTTGGCATGGAAGTTAGGAGTAGGTATTGGAATCTCGGGCATTGTTATAATTGGGCTACTAATTATATGGTACCGCAAACCAAGATGTGTGTTTGATTTCTTTTCAAATCCAAACCCAGAAAGTGCGAGTATCTACTTTGGGGTCCCTGTCTTCACCTATAAGGATCTTGTAATAGCAACAAAAAGTTTTGATCCTTCAAGAGAACTAGGAGAAGGAGGTTTTGGGATTGTTTACTATGGAAAACTCCGTGATGGACGTGAAGTTGCCGTGAAGCGGCTATATGAGCACAACTATAGGAGAGTAGAACAGTTCATGAATGAAATCAAGATCCTCACACGCTTGCGCAACAAAAACTTAGTCTCTCTCTATGGCTGCACTTCACGTGACAGCCGTGAACTACTGCTTGTTTATGAATACATTTCGAATGGAACTGTGGCCAGTCACCTCCATCATCATGAATCAGGGAATCATGGCTATTTGCCATGGCTTATCCGAATGAAAGTGGCCATTGAGACTGCTACTGCATTGGCCTATCTCCATGCCTCTGACATCATTCACCGTGATGTCAAAACCAGCAACATTCTGCTTGACAACACTTACTGTGTTAAAGTTGCAGATTTTGGATTGTCGAGACTGTTCCCACTTGATGTCACCCATGTTTCCACTGCTCCTCAAGGCACCCCTGGCTATGTTGATCCTGAATATCACCGTTGCTACCAACTTACCAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCTATGCCACCAATTGATCTTAACCGGCATAAGGATGAAATAAACTTGGCTGATCTAGCCATAAGGAAGATTTATAAAAATGCAATTGCTGAGCTGGTGGATCCTTCCCTTGGTTTTGAGTCAAATGGTGATGTTAAAACACAGATCACTGCGGTAGCAGAATTGGCTTTTCAATGCTTGCAACAGAACAAAGAATTGAGACCCTCCATGGATGAAGTGTTGGAGGCGCTGAAAATAATAGAAAGTCGGAAGGATGAAGAGCCATCATCACCATCTTCAGCAGATCATGATGAAGTGAAATTATTGATGAATATGAAGTTGCCACCTTCGCCAAAGGCTGCACAATATGCAGGCTTGAAGGGTAATGGAGTATATGGAAGCAGTAACTGTAGGAAAGTGACGGATCTTTCAAAAATTCCAGGGAACATGTGTTTTGTGTTTCAACAAGTCATTGGGTACGTGACTTTGGAGGTTTGGCTACTCGTTTTTCGAGTCAACCGCGGATAG 2073 0.4211 MHSMHLLFSVPKPFSYFIFHTHFLGFVLKSLIVYFSQLLLIVSAHQTGKCPPSLECGLLGQIQFPFTTTEQPHCGLLAIHGCQHDPSAPKTLQLGTSTTSTSYSVLKVEPRTIIIADDEQERYLRNKSCKAFSKNVTLPHTSPLASFRIKYNISIFRCNHSLKPSLPNYFHNYPNCSPEYDIFYAHPNTLSYTGFQWPSSLAPCSAIQLPLEGVPSEDPFQFLTGNIVVEVQLSHECERCLDGKGQCLLDTKGEFNCTTEPRNLAWKLGVGIGISGIVIIGLLIIWYRKPRCVFDFFSNPNPESASIYFGVPVFTYKDLVIATKSFDPSRELGEGGFGIVYYGKLRDGREVAVKRLYEHNYRRVEQFMNEIKILTRLRNKNLVSLYGCTSRDSRELLLVYEYISNGTVASHLHHHESGNHGYLPWLIRMKVAIETATALAYLHASDIIHRDVKTSNILLDNTYCVKVADFGLSRLFPLDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLIELISSMPPIDLNRHKDEINLADLAIRKIYKNAIAELVDPSLGFESNGDVKTQITAVAELAFQCLQQNKELRPSMDEVLEALKIIESRKDEEPSSPSSADHDEVKLLMNMKLPPSPKAAQYAGLKGNGVYGSSNCRKVTDLSKIPGNMCFVFQQVIGYVTLEVWLLVFRVNRG 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02914 690 Gene3D Transferase(Phosphotransferase) domain 1 403 611 - -
Phco6g02914 690 SUPERFAMILY Protein kinase-like (PK-like) 299 605 IPR011009 -
Phco6g02914 690 Gene3D Phosphorylase Kinase; domain 1 300 402 - -
Phco6g02914 690 SMART serkin_6 326 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02914 690 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Phco6g02914 690 Pfam Protein kinase domain 329 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02914 690 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Phco6g02914 690 ProSiteProfiles Protein kinase domain profile. 326 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02914 690 FunFam Wall-associated receptor kinase-like 20 403 612 - -
Phco6g02914 690 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 30 635 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02914 Phco-Chr6 50265278 50270284 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco6g02914 Pkinase 1.4e-47 CL0016