Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02912 ATGAGTCGGGTTCATGAATTTGTATCACTGCTTTTGTTTTCTAAGTTTGTGGCACTTCTCTTGGGGGCTGGGGACCAAGGAAGGTGTCCACCTTTATTTCATTGTGGATATCTTGGCAATATCACTTTTCCTTTTACTATAACTGAACGCCAAGACTGTGGCTTCTTGTCCATACGAAATTGTGATGATCCTGATCCACGTAAGATCAAATTTCTCCAATTACCACCAAATGGGAAGTTGTTTCAAGTTATAACCATAGCTCAGCTTCTGAGTAGCCCTACTACTCATTTCTCAACTTTGCAATTTAGAGACGAACATTTCTACGACCTTCTGCAGAACCGAAGTTGTAAAGCTTTCAGAAACAATTATACACTTCCTCATATTTCTGACTTTGCTGCTTTTAGATTGGTATACAACACAACTCTATTCTTGTGCAACCAGACCCTCAATGTCAACCCTTCCACAAATATAAATATCAGCAAGCATAAGTGCGATGACTACGATATCTACTACAATCTCACAGATGACGATAAGTCTTCTTTAACAGCATGCGAAAAGGTCCAGCTTCCAATTAAAGACGTGCCTGACGCCAGTGACCCATTTACTTTCGTAACTGGGGATGTCAGTATTAAAGTAGAATTAGCAGATAATTGTTCAGATTGCTACTATCGCCAAGGAGGGCAGTGTCAACTTGACAGCAGAGAAAATTTTTGTTGTGTCAATGTTCCGAAAAAAGGGTTGCGTTGGAAGGTCAGACTGGCTTTAGGTTTAGGTATTGGAATCCCATGCATGATGCTAATTGGGTTGTTGTTTTTCTTTCTACGCAACAAACGAAAATATGCTACCTCAGGTGGACATTTGGAGTCAAAAGATTCTTATTCTGATTCCTCCTCGATTCTGGATCGAGCAAGTAGTGGCGAATACTTTGGAGTTCCACTCTTCTCTTACGCGCAGCTTAAAGAAATTACAAACAATTTCGACCATACTCAGGAACTTGGAGATGGAGGCTTCGGCACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAACGGTTATACGAGCACAACTGGAGGCGAGTAGAACAGTTCATGAACGAAGTTAAGATCCTCACACGTTTGCGTCACAAAAATCTTGTGTCACTCTACGGCTGCACTTCTCGGCACAGCCGTGAACTCCTCCTTGTGTACGAATACATTTCAAACGGCACCGTAGCATGTCATCTCCACGGTGGATTAGCCAAGCCTGGTTTGCTACCATGGCCTACACGTATCAAAATTGCCATAGAAACTGCCAGTGCATTGGCTTATCTCCACGCCTCAGACATCATCCACCGTGACGTGAAAACAAACAACATTCTCCTGGACAACAACTTCGGTGTTAAGGTAGCAGATTTTGGGCTTTCAAGAGACTTCCCAAATGATGCCACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGTTACCTTGACCCTGAATATTACAGCCGGTACCAGCTCACTAGTAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCCAAGCCTGCTGTTGATTTGAACAGGAGTAGGGACGAGATTAACTTGTCAAATCTAGCAGTAAGGAAGATCCAAGAATGTGCAATTGGTGAACTTGTAGATCCTTGCCTTGGTTTTGATTCGGACAGTGGGGTTAAAGGGATGATAATTTCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAGGGGGAAACGGAGTTGAGACCTTCTATGGATGAGGTGTTGCATGAACTGCAGAGAATTGAGAGTGGGAAGGATGAGATAGGTGTTGATAATGTTGGAGTTTCAGATGGTTGTGCACATGCACAACCAGCAGCCTCACCCGAGTGGGATGAAGTTGGACTATTGAAGAATATGAAGCCTACTTCCCCTGACACTGTCACTGATAAATGGGAAAGTAAATGTACTACACCTAATGCAAGTGGCTAA 1989 0.4349 MSRVHEFVSLLLFSKFVALLLGAGDQGRCPPLFHCGYLGNITFPFTITERQDCGFLSIRNCDDPDPRKIKFLQLPPNGKLFQVITIAQLLSSPTTHFSTLQFRDEHFYDLLQNRSCKAFRNNYTLPHISDFAAFRLVYNTTLFLCNQTLNVNPSTNINISKHKCDDYDIYYNLTDDDKSSLTACEKVQLPIKDVPDASDPFTFVTGDVSIKVELADNCSDCYYRQGGQCQLDSRENFCCVNVPKKGLRWKVRLALGLGIGIPCMMLIGLLFFFLRNKRKYATSGGHLESKDSYSDSSSILDRASSGEYFGVPLFSYAQLKEITNNFDHTQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFMNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGGLAKPGLLPWPTRIKIAIETASALAYLHASDIIHRDVKTNNILLDNNFGVKVADFGLSRDFPNDATHVSTAPQGSPGYLDPEYYSRYQLTSKSDVYSFGVVLIELISSKPAVDLNRSRDEINLSNLAVRKIQECAIGELVDPCLGFDSDSGVKGMIISVAGLALQCLQGETELRPSMDEVLHELQRIESGKDEIGVDNVGVSDGCAHAQPAASPEWDEVGLLKNMKPTSPDTVTDKWESKCTTPNASG 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02912 662 MobiDBLite consensus disorder prediction 636 662 - -
Phco6g02912 662 Gene3D Transferase(Phosphotransferase) domain 1 403 614 - -
Phco6g02912 662 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 657 IPR044652 GO:0004672
Phco6g02912 662 SMART serkin_6 326 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02912 662 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 299 402 - -
Phco6g02912 662 ProSitePatterns Protein kinases ATP-binding region signature. 332 354 IPR017441 GO:0005524
Phco6g02912 662 Gene3D Phosphorylase Kinase; domain 1 301 402 - -
Phco6g02912 662 FunFam Wall-associated receptor kinase-like 20 403 609 - -
Phco6g02912 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672|GO:0006468
Phco6g02912 662 Pfam Protein tyrosine and serine/threonine kinase 329 528 IPR001245 GO:0004672|GO:0006468
Phco6g02912 662 SUPERFAMILY Protein kinase-like (PK-like) 307 596 IPR011009 -
Phco6g02912 662 MobiDBLite consensus disorder prediction 641 662 - -
Phco6g02912 662 CDD STKc_IRAK 332 601 - -
Phco6g02912 662 ProSiteProfiles Protein kinase domain profile. 326 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02912 Phco-Chr6 50251640 50254689 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Phco6g02912 PK_Tyr_Ser-Thr 2.1e-46 CL0016