Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02760 ATGAGCTGCAATGGTTGTCGTGTTCTCAGAAAGGGTTGCAGTGAGAACTGCATGCTACGACATTGCCTACAATGGATAGAGAACCCACAAGCCCAAGCTCACGCCACCCTCTTTGTGGCCAAGTTCTTTGGCCGTGCTGCTCTCATGTCTTTCCTTTCCCCCGTACCTGCCAACCAAAGATCCGCTTTGTTTCAGTCACTGCTTTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGCTGTTGTGGACTGGGAACTGGCAGCTGTGCCAAATGGGTGTGGAGAAAGTGCTCCGAGGTGGGGCTGCGTTGACCCCACTCCCTCACTTCTTGAGTAGTGCAGATGTACACCATCAACACCATGTAACTGAGAGAGTGATGGTTGGAGGTGGAATATTGTGTCACCAGGCAAAGAAGCAACGTGTGGGGACACCCTCTCAGGAATCTGAGACCTCCTATTTGGGACTTAAACCACAGGATTGTGCTCCTCAAAGTCAAAGGAACCTCCTTACACTATTCTTATGA 537 0.5047 MSCNGCRVLRKGCSENCMLRHCLQWIENPQAQAHATLFVAKFFGRAALMSFLSPVPANQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWQLCQMGVEKVLRGGAALTPLPHFLSSADVHHQHHVTERVMVGGGILCHQAKKQRVGTPSQESETSYLGLKPQDCAPQSQRNLLTLFL 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02760 178 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 140 - -
Phco6g02760 178 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Phco6g02760 178 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02760 Phco-Chr6 49009858 49016451 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Phco6g02760 LOB 1.1e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02760 6 49009858 49016451 Phco6g02760 6 49009858 49016451 ECH
Phco4g01183 4 9823016 9823814 Phco6g02760 6 49009858 49016451 PCT