Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02758 ATGGCCTTGGAGGCTCTCAATTCTCCAACAGCAGCCGCCACTCCCTTCGCTGCCTACCAAGAGGAGGAGGAGGAGGTTGACCTTCACTTCCGCGAGCCTTGGTCTAAGAGAAAACGCTCCAAACGACCGCGTTTTGAGACCGAGGAAGAGTACCTCGCTCTTTGCCTCATCATGCTCGCACAGAGCGGCAACAACAACAACAACACCACCAACGCTTCTTCTCGCCGCCAAACTCAACACTCACCGTCACAGTCACAGAAAGAACCGTCACCGCCGCTCAAATTATCCCACAGGTGCACCGTTTGCAACAAGGCCTTTCCTTCTTATCAAGCGCTCGGTGGACACAAGGCCAGCCACCGCAAGTCCTCGTCCGAATCCACCTCTGTCTCCATCGTTGTCAACGACAGCCTTGCCGCTTCCACCGTCGGAGGCGGCGGAAGGATGCACGAGTGCTCCATCTGTCACAAGAGTTTCCCCACCGGACAGGCCCTGGGTGGCCACAAGCGCTGCCACTACGACGGTGGCAACCACCACAGTAACAGCAACACCAACGCCAACAACGGCAGCGCCGTCACTTCCTCCTCCGACGGCGTGGCCGCCTCCTCCCACACGCTCCGTGGGTTTGACCTGAACCTTCCGGCGCCGCTGACGGAGTTCTGGTCACCGGTGGGGTTCGACTTCAGGAAGAAGGTCGGCGGAGTCGGCGAGCAAGAGGTGGAAAGCCCGTTGCCGGTAACCGCCACCAAGAAGGCGCGTTTGTTTTCAAGGGAGGACCACGATGATGATGATGATGAAACGGCGTAG 804 0.5883 MALEALNSPTAAATPFAAYQEEEEEVDLHFREPWSKRKRSKRPRFETEEEYLALCLIMLAQSGNNNNNTTNASSRRQTQHSPSQSQKEPSPPLKLSHRCTVCNKAFPSYQALGGHKASHRKSSSESTSVSIVVNDSLAASTVGGGGRMHECSICHKSFPTGQALGGHKRCHYDGGNHHSNSNTNANNGSAVTSSSDGVAASSHTLRGFDLNLPAPLTEFWSPVGFDFRKKVGGVGEQEVESPLPVTATKKARLFSREDHDDDDDETA 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02758 267 MobiDBLite consensus disorder prediction 175 197 - -
Phco6g02758 267 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 37 214 IPR044653 GO:0003700
Phco6g02758 267 ProSitePatterns Zinc finger C2H2 type domain signature. 99 119 IPR013087 -
Phco6g02758 267 SMART c2h2final6 149 171 IPR013087 -
Phco6g02758 267 SMART c2h2final6 97 119 IPR013087 -
Phco6g02758 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 149 171 IPR013087 -
Phco6g02758 267 Pfam C2H2-type zinc finger 149 173 - -
Phco6g02758 267 Pfam C2H2-type zinc finger 97 121 - -
Phco6g02758 267 MobiDBLite consensus disorder prediction 22 45 - -
Phco6g02758 267 Gene3D Classic Zinc Finger 94 171 - -
Phco6g02758 267 SUPERFAMILY beta-beta-alpha zinc fingers 97 171 IPR036236 -
Phco6g02758 267 ProSitePatterns Zinc finger C2H2 type domain signature. 151 171 IPR013087 -
Phco6g02758 267 MobiDBLite consensus disorder prediction 176 197 - -
Phco6g02758 267 MobiDBLite consensus disorder prediction 64 91 - -
Phco6g02758 267 ProSiteProfiles Zinc finger C2H2 type domain profile. 97 124 IPR013087 -
Phco6g02758 267 MobiDBLite consensus disorder prediction 1 45 - -
Phco6g02758 267 MobiDBLite consensus disorder prediction 64 95 - -
Phco6g02758 267 MobiDBLite consensus disorder prediction 234 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02758 Phco-Chr6 48986297 48987100 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Phco6g02758 zf-C2H2_6 1.3e-12 CL0361