Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02713 ATGTTTCGATTGTTATGTCCCTGGTTAAGCCTACCTACAAAGTGTGTTAATATGAAGCTTAGTTTACATGCTTCTACGTTGACTGAAAAATCTCAAACTCTTCTGCAATGCCGTGACAGTGGCACAATCCTTGTCCTTTATTCAAGCATCTTCCTTTATAGGCTCCTCTTATCCCATTTTTTTCCTTACTTCTTATTCCTCACATCACAAAACAATCAACATTCCAACATGGCTCTGCTTTTGCCAAGGCTACTTTTCTTTCTCTGTTGTCTTCCGATAACAATTTTTATATCTCAAGTCAGTGCAGCTAACAATACAAAAAACTTCTACTACTTCTGTGATGATACCAACGATAGAGGAAACTACACCACCAACAGCACCTACCACGCCAACCTCAACACCCTTTTGTCCACTCTCATTTCCAATACAGAAATCGATTACGGTTTCTACAATTTCACAAACGGTGAAAGCACTGATAAAGTGTACGCCATTGGGCTGTGTAGAGGAGACATTAAGCCAGATGAATGTCGCAGATGCCTTAACGATTCCAGGGCCAATCTCACTCAACTTTGTCCAAACCAAAAGGAAGTTATTGGTTGGTACGAGGATGAGAAGTGCATGTTGCGCTACTCAGACCGCCCAATATTCGGCCGTATGGAAGATGGAAAACCTGCGTATTTTATGTGGAATTTACAGAATGCAACGCAAGCGGAGGAGTTCAATAGAGTGCTAAGGGATTTGCTTGATGGGATGAGAAGCAGAGCTGCATCAGGGGACTCTCAAAGTAAATATGCTACAGCAAATGCAAAAGGACCAGATGACAAAACCATTTTCGGGCTTGCGCAGTGCACGCCTGATTTGTCTGAACAAGATTGCAATAACTGCTTGATTGAGTCCATCGAAGAATTCCGAAATTGTTGTGATAGTAAAATAGGAGCTAGAGTTGTTCGACCCAGTTGCAATCTGAGATATGAAACTTCCTTTCAATTCTATGGGGCTCCAGCATATGCACCCTCACCATCATTTTCGCCACCTTCTAACACTTCCTCAGAAGGAAAGAGCAACACAGTTATCATCGCCATAGCAACAGCAGTGCCAGTTGTTGTAATTGTTTCCGCGGTGCTTATTTTTATCTACATTCGTTTAATAGCGAGGAAGTCGAGGATAAAGTTTGAAACTAAACAAGAAGAACTATATGATGATGATGATGATGGAATTGACGCTTCTGAGTCATTGCAAATCAGATTCAACATCATACGAGAGGCTACAAATGACTTTTCTGATTCTAATAAACTCGGACAGGGTGGATTTGGGGCTGTTTACAGAGGTACGCTTCCCAATGGACAAGAGATTGCCGTCAAAAGTGGATACATGGCACCTGAGTATGCATTGCATGGACACTTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGTGTACTTGTTCTTGAGATTGTAAGTGGCCAGAAAATCACTAGCATTCAACATGGAGAGGAAACGGGCGACATACGCCATATTGCATGGCGAAGTTGGAGGGAAGGAAGAGCAAGAGATGTTGTAGATCCGACATTAAACAATGGTTCGGAAAGTGAAATAATGAGATGCATCCATATTGGGTTACTGTGCGTTCAAGACAATGTAGCTGCGAGACCGACCATGGCTTCCGTTGTACCCATGTTGAATAGCCATTCTTTGAGTCTGCAAGTACCTACGGCACCAGCGCTTTATGGAAATGCTATGTCTGGAATCTTTGAAGACATGCAGTTATGGGAGATTAATTCAGGGACAACGAGATCAAACGAATCCACCAATAGAAAAGATCAAGATTCGCTCAATGAGGCTTCAATTACCGAGCCATATCCTCGCTAG 1866 0.4223 MFRLLCPWLSLPTKCVNMKLSLHASTLTEKSQTLLQCRDSGTILVLYSSIFLYRLLLSHFFPYFLFLTSQNNQHSNMALLLPRLLFFLCCLPITIFISQVSAANNTKNFYYFCDDTNDRGNYTTNSTYHANLNTLLSTLISNTEIDYGFYNFTNGESTDKVYAIGLCRGDIKPDECRRCLNDSRANLTQLCPNQKEVIGWYEDEKCMLRYSDRPIFGRMEDGKPAYFMWNLQNATQAEEFNRVLRDLLDGMRSRAASGDSQSKYATANAKGPDDKTIFGLAQCTPDLSEQDCNNCLIESIEEFRNCCDSKIGARVVRPSCNLRYETSFQFYGAPAYAPSPSFSPPSNTSSEGKSNTVIIAIATAVPVVVIVSAVLIFIYIRLIARKSRIKFETKQEELYDDDDDGIDASESLQIRFNIIREATNDFSDSNKLGQGGFGAVYRGTLPNGQEIAVKSGYMAPEYALHGHFSEKSDVFSFGVLVLEIVSGQKITSIQHGEETGDIRHIAWRSWREGRARDVVDPTLNNGSESEIMRCIHIGLLCVQDNVAARPTMASVVPMLNSHSLSLQVPTAPALYGNAMSGIFEDMQLWEINSGTTRSNESTNRKDQDSLNEASITEPYPR 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02713 621 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 87 338 - -
Phco6g02713 621 MobiDBLite consensus disorder prediction 595 621 - -
Phco6g02713 621 ProSiteProfiles Gnk2-homologous domain profile. 222 329 IPR002902 -
Phco6g02713 621 Pfam Protein tyrosine and serine/threonine kinase 455 490 IPR001245 GO:0004672|GO:0006468
Phco6g02713 621 FunFam Cysteine-rich receptor-like protein kinase 10 224 329 - -
Phco6g02713 621 Gene3D Transferase(Phosphotransferase) domain 1 420 569 - -
Phco6g02713 621 ProSiteProfiles Gnk2-homologous domain profile. 110 215 IPR002902 -
Phco6g02713 621 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 106 215 - -
Phco6g02713 621 SUPERFAMILY Protein kinase-like (PK-like) 411 454 IPR011009 -
Phco6g02713 621 Pfam Salt stress response/antifungal 232 326 IPR002902 -
Phco6g02713 621 Pfam Salt stress response/antifungal 113 212 IPR002902 -
Phco6g02713 621 Gene3D - 106 214 IPR038408 -
Phco6g02713 621 Gene3D - 223 328 IPR038408 -
Phco6g02713 621 SUPERFAMILY Protein kinase-like (PK-like) 456 559 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02713 Phco-Chr6 48660544 48666234 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02713 PK_Tyr_Ser-Thr 1.2e-07 CL0016