Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02710 ATGGCAGCCGTCTCCTGCATGCTTATTCTCTTTCTTTCTTTTCCATTTCTAAAATTTATATCTCTAGGCGGCGCCCAGAACGTTATATGTGACGACGACCACGGCAACTACACAGCCAACAGCACCTACAGCGCCAACCTCAACACCCTCTTATCCACTATCTCTTCCAACACACAAATTCAATACGGTTTCTACAACTTTTCATATGGCCAAAACAGTGACACAGTATACGCCATAGGGCTGTGCAGAGGAGATCAACAGCCACAGGAGTGCCGCAGCTGCCTCAACAATTCCAGAGTCGATCTAACAGAGAGGTGTCCAAACCAGAAAAAGGCAATTCTGTGGTCCAGTAGTTGCATGTTGCGCTACTCTAACCACACAATATTCCATCAAATGGAAACTTCTCCTGGTTATTACATGTGGAACCAAGCAAATGCAACAGACGCGAATCAGTTCAATGAAGTGCTCGGGAACTTAATGAAGAGCCTAAGAGACACAGCTGCATCAGGTGACTCCCGTCGTAAGTATGATACAGCGGAAAATGAAACTGGTTTAAATTTTCAAACCGTATATGGGCTTGTGCAGTGCACCCCTGATTTGTCTCAGCAAGAGTGTAATCAATGCTTAGATGGGGCTATCTCAGAGATCCCAAAGTGCTGCAATGGCAAGATAGGTGGTAGAGTTCTTAAACCAAGTTGTAATATTAGATTCGAAACTAACAGCTTCTACGGAAATACAACTACATTAGACCCAGATCCGGAGGCACCTCCTCCCTCCACCAATACCACTTCCTCACAAGATCCAGCCATGAAAGCACAATTGGATTGGGAAAAGCGTTACAAAATCATTAGAGTGAAATCAGACGTCTTCAGTTTTGGTGTACTGATTCTTGAGATTGTAAGCGGCCAGAAAAACAGTGGAATTTATAATGGAGAGAATATGGAGGATCTATCAAGCTTCGCTTGGAGAAACTGGAAGGAGGGGAAGGCTATAAATATTGTAGATCCGGCACTGAACAGCAATTCACGGAATGAAATGCTGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACCATGACTAACATTATGTTGATGCTTAACAGCTATTCTCTGAGTCTCCCGATTCCTACAGAACCAGCATTTTATATGAACAGTAGAACTAGAAGCCTTCCAGAGATGCAGTCATGGGAGTATAATTCACGGGAAACAGGATCAAGTGAACCAATACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGAGCTATACCCTCGCTAG 1311 0.431 MAAVSCMLILFLSFPFLKFISLGGAQNVICDDDHGNYTANSTYSANLNTLLSTISSNTQIQYGFYNFSYGQNSDTVYAIGLCRGDQQPQECRSCLNNSRVDLTERCPNQKKAILWSSSCMLRYSNHTIFHQMETSPGYYMWNQANATDANQFNEVLGNLMKSLRDTAASGDSRRKYDTAENETGLNFQTVYGLVQCTPDLSQQECNQCLDGAISEIPKCCNGKIGGRVLKPSCNIRFETNSFYGNTTTLDPDPEAPPPSTNTTSSQDPAMKAQLDWEKRYKIIRVKSDVFSFGVLILEIVSGQKNSGIYNGENMEDLSSFAWRNWKEGKAINIVDPALNSNSRNEMLRCIHIGLLCVQENLVDRPTMTNIMLMLNSYSLSLPIPTEPAFYMNSRTRSLPEMQSWEYNSRETGSSEPILKSAQESENEASITELYPR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02710 436 ProSiteProfiles Gnk2-homologous domain profile. 134 242 IPR002902 -
Phco6g02710 436 FunFam Cysteine-rich receptor-like protein kinase 10 136 242 - -
Phco6g02710 436 MobiDBLite consensus disorder prediction 401 436 - -
Phco6g02710 436 ProSiteProfiles Gnk2-homologous domain profile. 25 128 IPR002902 -
Phco6g02710 436 MobiDBLite consensus disorder prediction 244 269 - -
Phco6g02710 436 Gene3D - 134 242 IPR038408 -
Phco6g02710 436 Gene3D - 26 127 IPR038408 -
Phco6g02710 436 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 26 252 - -
Phco6g02710 436 SUPERFAMILY Protein kinase-like (PK-like) 283 407 IPR011009 -
Phco6g02710 436 Gene3D Transferase(Phosphotransferase) domain 1 261 381 - -
Phco6g02710 436 MobiDBLite consensus disorder prediction 401 429 - -
Phco6g02710 436 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 24 128 - -
Phco6g02710 436 Pfam Salt stress response/antifungal 145 239 IPR002902 -
Phco6g02710 436 Pfam Salt stress response/antifungal 30 125 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02710 Phco-Chr6 48645919 48648958 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02710 Stress-antifung 2e-16 No_clan