Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02699 ATGAACGACAAGGGTAATTACACTGCTAACAGTACCTACCACAACAACCTCAACACCCTTCTGTCCAACCTCTCTTCAAACACAGATATTGACTATGGCTTCTACAATTTTTCATATGGCCAAGAAAGTGACAGAGTTAACGCAATTGGGCTGTGCAGAGGAGATGTTAAGCCAGATGCTTGCCGTAGATGTTTGAATGATTCAAAAGTCCTTCTCACGCAACTGTGTCCAAATCAGAAGGAGGCGATTTTGTGGTATGACTACTGCATGTTACGCTATTCCAACCGCTCAATATTCAAGACCATGGAAGCCACACCTGGATTCTCTATGCGGACCTATAATGCAACCGATGGTGATAATTTCAATGAAGTGCTGAGGAAATTGCTAGAGAGCCTCACAAGCCAAGCTTCATCAGGCGACTCTCGGCGTAAGTTTGCTGTAGCAAATGCTTCAGGACCAGCCTTTCAAACTATATTTGGTCTTGTTCAGTGTACACCTGACCTTTCAGAAAAACACTGTGATGAATGCCTGCTTAAGACTATCGCAGAAATTCCACAATGTTGTAATGGCAGTAAAGGTGCTAAATTTTTTAAACCCAGTTGTATCATCAGATATGAGATATTCCCCTTCTATGATCCTACCAATGCTGCAACACATGCATCACCACCACCACTACCGCAGCCGTCAACAAAAGGAAAGATATTTGTATCTGGAACTGTAATAGTAATATCTGTGACAATTATTGCCTTTGTCATTCTAGTCAACCTTATCTGCTGCATCAATTTAAGAATGAGGAGTTGTCGGAAACAATTTGAAGCTGAAAATGATGACGAGATTCAGTCAACGAAGACATTACCATTGGAATTCGCCAGTATCATGGTTGCTACCAACTACTTCTCTGATGCAAATAAGCTAGGAGAAGGAGGATTTGGGCCTGTTTACAAGGCTGGTTGCCCTGACCTACATTCATCAACTTTAAACTTTCAGGGTAGGCTCTCCGATGGTCAGGAAGTAGCAGTGAAAAGTGGATATATGGCACCAGAGTATGTTATCCGTGGACAATTCTCAGTAAAATCTGATGTTTTTAGTTTTGGAGTATTGGTTCTTGAGATTGTTAAGGTTGAACATGTTACTTATGGAATTGTAAACTTTAAGATTGAATCTGAATCAATATTTCTAATATTGATCAGACATGGCAAAACTGGAGGAAAAGCACAACGTCAAACATCGTTGATCCCACAATCAGTGGTTCCAGCAATGAAATAA 1266 0.4076 MNDKGNYTANSTYHNNLNTLLSNLSSNTDIDYGFYNFSYGQESDRVNAIGLCRGDVKPDACRRCLNDSKVLLTQLCPNQKEAILWYDYCMLRYSNRSIFKTMEATPGFSMRTYNATDGDNFNEVLRKLLESLTSQASSGDSRRKFAVANASGPAFQTIFGLVQCTPDLSEKHCDECLLKTIAEIPQCCNGSKGAKFFKPSCIIRYEIFPFYDPTNAATHASPPPLPQPSTKGKIFVSGTVIVISVTIIAFVILVNLICCINLRMRSCRKQFEAENDDEIQSTKTLPLEFASIMVATNYFSDANKLGEGGFGPVYKAGCPDLHSSTLNFQGRLSDGQEVAVKSGYMAPEYVIRGQFSVKSDVFSFGVLVLEIVKVEHVTYGIVNFKIESESIFLILIRHGKTGGKAQRQTSLIPQSVVPAMK 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02699 421 ProSiteProfiles Gnk2-homologous domain profile. 103 210 IPR002902 -
Phco6g02699 421 ProSiteProfiles Gnk2-homologous domain profile. 1 98 IPR002902 -
Phco6g02699 421 SUPERFAMILY Protein kinase-like (PK-like) 290 378 IPR011009 -
Phco6g02699 421 Gene3D - 1 97 IPR038408 -
Phco6g02699 421 Gene3D - 107 210 IPR038408 -
Phco6g02699 421 Pfam Protein tyrosine and serine/threonine kinase 336 379 IPR001245 GO:0004672|GO:0006468
Phco6g02699 421 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 3 218 - -
Phco6g02699 421 FunFam Cysteine-rich receptor-like protein kinase 10 107 210 - -
Phco6g02699 421 Pfam Salt stress response/antifungal 5 95 IPR002902 -
Phco6g02699 421 Pfam Salt stress response/antifungal 114 206 IPR002902 -
Phco6g02699 421 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 1 98 - -
Phco6g02699 421 Gene3D Phosphorylase Kinase; domain 1 261 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02699 Phco-Chr6 48592670 48595482 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02699 Stress-antifung 3.5e-16 No_clan