Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02697 ATGATTATCTTCAACATCAATTGCTGCATCTCATTTCTTCTCCTCTCCCTATTAGGATCCCTTACACCATTAACCTCAGCAGCTCCCAAATACAACGACATTTACTGTCCCAACAACGCCACCTACCAATCCAACACCACCACATTTCAAACAAATCTCAATGTCCTCTTCGCTTCTCTCACCTCCAACGCCACTCAAGGCGTTGTGTCCTACACCACCACAATGGGCTTCGGAACCACCAACGCCGTCAACGGCCTCTTCCTCTGCCGCGCGGACCTCTCCTCCGCCACCTGTTACGACTGCGTCGCCACCGCAGTCACAGAAATAAGACGGCGCTGCCCAAACCAGACAGAGTCCATAATCTGGTATGACGAGTGCATGGTACGCTACACAAACCGCTACTTCACCCCCACCAGCGTGGTTCCAAGAGCCAACTTATGGGACGACAAGAACATCTCCACCTCGGATTGGGGAAGCTTCAATCAAACGTTGTCAAGCTTGTTGAGCGGTTTGGCTACCGAAGCTGCGGGTTCCCAGTCAGCGTCGAAATTTGCCATCGGGGAAATGAACTTCACCGCCACTTCGCGCGTGTATGGGTTGGCGCAGTGTGCGAGCGGCATGACGAATGCTCAGTGTGAAGCGTGTTTGGTGAATGCGTCGATAACGCTTGGCACGTGCTGCCAAGGAAAGCAAGGTGCTAGAGCTCTTCTTGCGTGGTGTAACATTAGATACGATCTTTACCAGTTTTACAACACAAGCACTGCGTCGTCTCCTGTTCCTTCTCCTCCTCCTCCTCCTTCAGAAAAGAAGAAGTCTGGGTCACAAAGAACTATCATAATTGTTGTGGTTGTGGTGGCTACTATAATTCTCTTTTGTTCTGGTGGCTATTTCCTAGTGAGAAGATCAAGGAGGAATTATAAGACTCTTTTAAAAGAAAACTTTGGGGATGAAAGCGCTACTTTAGAGTCATTGCAATTTAATTTGGCAACCATTGAAGTAGCTACAAAGAAATTCTCATATGAGAACAAAATTGGCAAGGGAGGATTTGGAGAGGTTTATAAGGGTATTCTCTTGGATGGAAGACACATAGCTGTGAAAAAACTCTCTCGTACTTCAGGACAGGATTTTGGCCTAGCAAGAATTATTGCTTTGGAACAAAATCAAGGAAGTACAAATAGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGAAAAATCTGATGTTTATAGTTATGGAGTTATAGTTTTAGAGATCATAAGTTCAAAAAAGAATAGTCGTTCATTACTATCGGGTGACATGGATGATATCTTGAGTCATGCTTGGAGATACTGGAGAGATGAAACACCCTTAAAAATATTGGACCAAAATATTGAAGAATCTAGCAACCACAATGAAGTGCTGAAATGCATTCAAATTGGTCTACTGTGTGTCCAAGATAAACATAACGATAGACCAACAATGGCAGAAGTTATTTCCTATCTCAGTAATCCATCAGTTGACTTGCCATATCCAGGAGAACCGACGAACACTATGCATAAAAAAATATTGAAAAAAATGATTGCAGGAGAGTTCAGCACCAGTTCTACATTTATCAACGAAGTCTCCTCTTCGATAGAACAAAGCTCTACACCCTCACTCGATTCTTAA 1674 0.4391 MIIFNINCCISFLLLSLLGSLTPLTSAAPKYNDIYCPNNATYQSNTTTFQTNLNVLFASLTSNATQGVVSYTTTMGFGTTNAVNGLFLCRADLSSATCYDCVATAVTEIRRRCPNQTESIIWYDECMVRYTNRYFTPTSVVPRANLWDDKNISTSDWGSFNQTLSSLLSGLATEAAGSQSASKFAIGEMNFTATSRVYGLAQCASGMTNAQCEACLVNASITLGTCCQGKQGARALLAWCNIRYDLYQFYNTSTASSPVPSPPPPPSEKKKSGSQRTIIIVVVVVATIILFCSGGYFLVRRSRRNYKTLLKENFGDESATLESLQFNLATIEVATKKFSYENKIGKGGFGEVYKGILLDGRHIAVKKLSRTSGQDFGLARIIALEQNQGSTNRIVGTYGYMSPEYAMHGQFSEKSDVYSYGVIVLEIISSKKNSRSLLSGDMDDILSHAWRYWRDETPLKILDQNIEESSNHNEVLKCIQIGLLCVQDKHNDRPTMAEVISYLSNPSVDLPYPGEPTNTMHKKILKKMIAGEFSTSSTFINEVSSSIEQSSTPSLDS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02697 557 Gene3D Phosphorylase Kinase; domain 1 298 376 - -
Phco6g02697 557 ProSitePatterns Protein kinases ATP-binding region signature. 344 367 IPR017441 GO:0005524
Phco6g02697 557 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 375 543 - -
Phco6g02697 557 Gene3D - 143 249 IPR038408 -
Phco6g02697 557 Gene3D - 30 135 IPR038408 -
Phco6g02697 557 ProSiteProfiles Gnk2-homologous domain profile. 140 249 IPR002902 -
Phco6g02697 557 FunFam Cysteine-rich receptor-like protein kinase 10 142 249 - -
Phco6g02697 557 Pfam Salt stress response/antifungal 156 246 IPR002902 -
Phco6g02697 557 Pfam Salt stress response/antifungal 36 132 IPR002902 -
Phco6g02697 557 SUPERFAMILY Protein kinase-like (PK-like) 326 520 IPR011009 -
Phco6g02697 557 Pfam Protein tyrosine and serine/threonine kinase 375 503 IPR001245 GO:0004672|GO:0006468
Phco6g02697 557 Gene3D Transferase(Phosphotransferase) domain 1 377 510 - -
Phco6g02697 557 ProSiteProfiles Protein kinase domain profile. 149 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02697 557 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 135 - -
Phco6g02697 557 ProSiteProfiles Gnk2-homologous domain profile. 30 135 IPR002902 -
Phco6g02697 557 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 382 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02697 Phco-Chr6 48579610 48583230 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02697 PK_Tyr_Ser-Thr 2.9e-13 CL0016