Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02696 ATGTTTTGGCGCAACATGTTCCTCTCCAGCTCCAACAACCATGTAACCTTTCTTCTGTTCCTGTCTCTGTTCGGAATTGAACCGTTTTTTTCCTCTGGAGCTCCGGTTTACAATTACTGCCCAAGCAACGCGTCCTACAATTCCAGCGTAACATTCGAAACCAATCTCAAAATCCTCCTCGAATCTCTCGTCTCCAACATTTCTCAATCCGACGGCTCCTATTCCTCCGCCATGGGCTTGGGGACCACAAGTGTCGCCAGCGGCTATTTCCTCTGCCGCGGCGACGTCTCCCTCACCATGTGTAACGACTGCATCACCACCGCCGTCACCGAAATAACACAACTCTGCCCAAACAAAACAGAGTCCATAATATGGTACGACGAGTGCACGCTCCGTTTCACCAACAGGTACTTCAGCCCCACCGCCACCGAACCGGGAGCCAGCTTGTCGAACAATAAAAACATATCCGCCTTGGACTTGGACAGCTTCAACCATACGTTGTTCGGCTTGTTGGACGATTTGCTGGAAGAGACTGCGAACTCTAACTCGGCGAGAAAATTCGCCACCGGCGATAGAGAATTCGCCGGAACCTCGTCTCAGAGAACGGTGTACGCCCTGACGGAGTGCGAGCCGACCTTAACGAAACCTGAGTGTGAAGAGTGTTTGCAAAATGCCATTTCAACTCTTCCATCGTGCTGCGAAGGAAAACAGGGCGCCAGGGCTCTGCTTGCGTGGTGTAATGTTAGATACGATTGGTTTCAGTTTTACAATGCGAGCGCCACGTCTGCACCCTCATCAGGAAATAACAGTAATGTAGTACGAGTACTCGTCATTGTTGCCCTTGTTATTGTGTCGATAATTCTCTTATGTGGTGTCTGCTATTTCATATTCAAAAGATCAAGGAAGAAATACAATACTCTTCTAAGGGAAAATTTTGGGGAAGAAAGTTCCACTTTGGAATCGTTACAATTTGATTTGGCCACAATGGAAGTTGCCACAAAGAAGTTTTCACATGAAAACAGGATAGGTGAAGGTGGATTTGGAGATGTTTATAAGGGTATCCTTCCAGATGGACGAGAAATAGCAGTTAAAAAACTTTCTCATAGTTCAGGCCAAGATCAATATGAAGGAAAAACAAACCGAATCGTGGGAACATACGGATACATGTCTCCTGAATATGCAATGTATGGAAATTTTTCGGAAAAATCAGATGTGTTTAGTTTTGGAGTTATAGTGTTAGAAATACTTAGCGCGAAAAAAAATTCTAGACATGTTTTCTCAGATCATGATAACCTCTTGAGTTATGCTTGGGATCAATGGAGGGATCAGACACCACTAAACATATTAGACGAAAATATTAAGGAATCTTGCAATGACAGTGAAGTGGTTAAATGCATCCAAATAGGTTTATTATGTGTACAAGAGAAGCCACAGGACAGACCTACAATGACGCAAGTTGTTTCATATCTCAGTGGCTCTTTATCTGAGTTGCCATTTCCTGAAAAACCCATAAATTGTAATCAAAGTGGAATAGTTCAACGGATGCTAGTTGGAGGATCTAGTTCAGGTTCTGCACTATCAAAAAATGAAATGTCTGTCACCATATTTGCCGCGACGGCTCCTACCAAACCATCATCGGTTCGCCATCCTCAGACCTCGCCGCCGGCGTCTTCCTCCGCCGCCACGTGTAAGAACTGCGTGGCCACAGCCGCCTCGGAAATAACACGCCGTTGCCACAACCAAACGGAGTCCATAATATGGTACGATCAGTGCATGGTAGCCTACACAAACGATTGGTTCGACCCCCTGGGCGTGGACCCGAAAGTGAACCTGTGGGATAATAAGAGCGTCTCTACCTCGGATTTCGAAAACTTTAACCGAACGTTGTTTGGGTTGCTGAACGGTTTGGCTGAGGATGCCGTGAGTTCGGAGTCAACGAAGAAATTCGCGACTGGGGAAGCGGAGGATAGGGTTGGGTCGTGGCGACGAGTGTACGGCATGGTACAGTGCGTGCCCAGCGCCACCAATGATCAGTGTGAGACGTGTTTGAAACATGGTATCGGAACTCTCTTTTCTGCGTGTTGCGAAGGAAAACAGGGCGCAAGAGCTCTGCTTGCGTGGTGTAACATCAGATACGAGTTGTATCAGTTTTACAACACAACACTCACACCATCAACGCCACTGGTTCCTTCTCCTGCTCCTTCAGTTGGAGATGAAAGAGATAAGATGGAGTTGCTGCAATTCAATTTCCTGACAGTGGAGGCAGCCACAAACAAGTTTTCTTCTGAAAACAAAATAGGAAAAGGTGGATTTGGAGAAGTTTACAAGATTGCTTCACGCCAACATGACCAAGCAACTTGTCATTCAAAACAACAAGTTCAACACTATACAAAGCAAGAGGTCAAGTCTCACCCTACAACTCCTCCTAGACCAGTTGAGGATACACGTAGAGCTTTCTTGAGAAAGGTCGACCACATGTATCCCACCAATGTTGAATCCTAA 2502 0.4604 MFWRNMFLSSSNNHVTFLLFLSLFGIEPFFSSGAPVYNYCPSNASYNSSVTFETNLKILLESLVSNISQSDGSYSSAMGLGTTSVASGYFLCRGDVSLTMCNDCITTAVTEITQLCPNKTESIIWYDECTLRFTNRYFSPTATEPGASLSNNKNISALDLDSFNHTLFGLLDDLLEETANSNSARKFATGDREFAGTSSQRTVYALTECEPTLTKPECEECLQNAISTLPSCCEGKQGARALLAWCNVRYDWFQFYNASATSAPSSGNNSNVVRVLVIVALVIVSIILLCGVCYFIFKRSRKKYNTLLRENFGEESSTLESLQFDLATMEVATKKFSHENRIGEGGFGDVYKGILPDGREIAVKKLSHSSGQDQYEGKTNRIVGTYGYMSPEYAMYGNFSEKSDVFSFGVIVLEILSAKKNSRHVFSDHDNLLSYAWDQWRDQTPLNILDENIKESCNDSEVVKCIQIGLLCVQEKPQDRPTMTQVVSYLSGSLSELPFPEKPINCNQSGIVQRMLVGGSSSGSALSKNEMSVTIFAATAPTKPSSVRHPQTSPPASSSAATCKNCVATAASEITRRCHNQTESIIWYDQCMVAYTNDWFDPLGVDPKVNLWDNKSVSTSDFENFNRTLFGLLNGLAEDAVSSESTKKFATGEAEDRVGSWRRVYGMVQCVPSATNDQCETCLKHGIGTLFSACCEGKQGARALLAWCNIRYELYQFYNTTLTPSTPLVPSPAPSVGDERDKMELLQFNFLTVEAATNKFSSENKIGKGGFGEVYKIASRQHDQATCHSKQQVQHYTKQEVKSHPTTPPRPVEDTRRAFLRKVDHMYPTNVES 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02696 833 Gene3D Transferase(Phosphotransferase) domain 1 361 498 - -
Phco6g02696 833 ProSiteProfiles Gnk2-homologous domain profile. 143 255 IPR002902 -
Phco6g02696 833 Pfam Salt stress response/antifungal 620 715 IPR002902 -
Phco6g02696 833 Pfam Salt stress response/antifungal 161 251 IPR002902 -
Phco6g02696 833 Pfam Salt stress response/antifungal 40 135 IPR002902 -
Phco6g02696 833 Pfam Salt stress response/antifungal 559 597 IPR002902 -
Phco6g02696 833 ProSiteProfiles Protein kinase domain profile. 157 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02696 833 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 559 778 - -
Phco6g02696 833 Gene3D - 534 600 IPR038408 -
Phco6g02696 833 Gene3D - 146 255 IPR038408 -
Phco6g02696 833 Gene3D - 33 138 IPR038408 -
Phco6g02696 833 Gene3D - 608 717 IPR038408 -
Phco6g02696 833 FunFam Cysteine-rich receptor-like protein kinase 10 607 717 - -
Phco6g02696 833 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Phco6g02696 833 ProSiteProfiles Gnk2-homologous domain profile. 485 600 IPR002902 -
Phco6g02696 833 ProSiteProfiles Gnk2-homologous domain profile. 34 138 IPR002902 -
Phco6g02696 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 371 494 - -
Phco6g02696 833 SUPERFAMILY Protein kinase-like (PK-like) 742 803 IPR011009 -
Phco6g02696 833 Gene3D Phosphorylase Kinase; domain 1 738 823 - -
Phco6g02696 833 ProSiteProfiles Gnk2-homologous domain profile. 605 717 IPR002902 -
Phco6g02696 833 SMART tyrkin_6 336 490 IPR020635 GO:0004713|GO:0006468
Phco6g02696 833 Pfam Protein tyrosine and serine/threonine kinase 374 490 IPR001245 GO:0004672|GO:0006468
Phco6g02696 833 SUPERFAMILY Protein kinase-like (PK-like) 324 506 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02696 Phco-Chr6 48564174 48575175 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02696 PK_Tyr_Ser-Thr 2.8e-11 CL0016