Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02695 ATGCTAGCCCCCAACTTCTGTACAACCTCGTTAACGCTTCAATTACTATGTCTGTTATGTATGCTCTTTCATGCAACTGCATCAGCACCCGTTTACAATGCCCACTTCTGCACCAACCAAACCTTTTACGCATCCGACACCAAATTTCAGTCTAACTTGAATACCCTTCTCTCTTCTCTGGTTTCAAACTCCTCCCTTCCCTCCAACAACGGTTTCCTCCGAACCTCCGTCGCTAAAGGCACCCCCGACGATATCGACGGCCGTTTCCTCTGCCGTGGCGACGTCAACGAAACCGTCTGCCACGGCTGCATCGCCGCAGCAGCAGCGAACATAACGCGCCTCTGTCCCAATGATACCGAGTCCTATATCTGGTACGATGTGTGTACGCTAATCTACTCCAACAGCACCTACGACAATGATAACATAGTTCCCGGGATTCCCATCAACGACGAAGGAAGCATCGTTAACTCAAATCAGGACCAGTTCAACCAATTACTGTCGAGCTTGTTAAACAGTTTGGAGGAAAAAGCTTCGGCGAGTTCCATGGGACAGAAGAAGTTCGCTGCGGGTACGGTGAGTGTGACGAGCGCGCAAACGCTGTACGGAATGGCGCAGTGCGAGCCTGACGCCACTAGTGGTAGTTGTGCGGCGTGCTTTGGAAGCGCAATTGCAAGTATTCCATCGTGTTGCAACGGAAGTGGAGGAGCAAGGGTTCTGCTTCCCATATGTAGCATCAGATACCAACTGTATCCCTTTTTATACAATTCCACTCCGATGATGCTCATTCCTTCTTCAGGTAGCAAAAGTGCATTGATGGTTGTGGCAATTGTTGTCCCTATTGCTATTTTGGCGATGCTTTTGTTTATAGGATGCTGTTGGTGGCGAAGAAGGCAAAGAAAAAACCGTGAGGATGTCCAGGAAGTGAATGATAGCATTAGGAGATATTTAACTAGTGAGGAAGAGTCTTTGCGGTTTGACTTGGCTACAATCGAAGCAGCCACGAATAGTTTCTCAAATGAGATGAAGATAGGAGAAGGTGGATTTGGTGCGGTTTATAAGGGTACCTTTCCTAATGGAGAAGAGATAGCTGTGAAGAGAATATCAAGAACCTCTCTCCAAGGTGACAGAGAATTCAAGAACGAGGTTCTACTTGTTGCTCAGCTTCAACACAGAAATTTAGTTAGACTGTTAGGATTTTGCATGGAGGGAACGGAGAGGATACTGGTTTACAAATTTATCCAAAATTCCAGCCTTGATCGCTTTCTATTCGGTCACGAAGACCAAGGAGGGCTAGACTGGGCAAGACGTTACAAAATTATAGTTGGGGTTGCATGTGGAATTCAATATCTCCATGAAGATTCTCGGCTAAAAGTAATACACCGTGATCTCAAGGCATCTAATGTTCTATTAGATGCCGATATGAACCCAAAGATTTCCGACTTTGGGATGGCAAAGTTTTTTCATGGAGATCAAAGTCAAGAAAATACAAGAACAGGAAGGGTAGTTGGAACTTTCGGTTACATGTCTCCTGAATATGCTATGCATGGAAAATTCTCAGTGAAATCCGACGTGTTCAGTTTTGGAGTCTTGGTTTTGGAGATCATCAGTGGCAAGAAGAACAGTAGTTATTATCGATCACATGACGACAATGAGCTCTTGAGCTTTGCTTGGAAGAATTGGATAGATCAAACACCTTTCCAGATATTGGACCCAAAACTGAGAGGTTCTTATTCTAGAAGTGAAGTTCAGAGATGCATCCATATTGCTTTATTATGTGTTCAAGAAAACCCAGTTGAGAGACCTTCAATGGCGACAATAATGCTTGCATTGAACGCTTATTCAGTAACTTTAGGGTTGCCTCGAAAGCCAGCATTTTTTGTGACAGGAAGAGCGACAACAGACAGATTAAGACACCAGCTTGACTCTGATCAGTCCAACAGTTCTTCAGTCCCTTTTTCTGCTGGTGATTCATTAATCACTCAGGTATATCCCCGTTAA 1998 0.4469 MLAPNFCTTSLTLQLLCLLCMLFHATASAPVYNAHFCTNQTFYASDTKFQSNLNTLLSSLVSNSSLPSNNGFLRTSVAKGTPDDIDGRFLCRGDVNETVCHGCIAAAAANITRLCPNDTESYIWYDVCTLIYSNSTYDNDNIVPGIPINDEGSIVNSNQDQFNQLLSSLLNSLEEKASASSMGQKKFAAGTVSVTSAQTLYGMAQCEPDATSGSCAACFGSAIASIPSCCNGSGGARVLLPICSIRYQLYPFLYNSTPMMLIPSSGSKSALMVVAIVVPIAILAMLLFIGCCWWRRRQRKNREDVQEVNDSIRRYLTSEEESLRFDLATIEAATNSFSNEMKIGEGGFGAVYKGTFPNGEEIAVKRISRTSLQGDREFKNEVLLVAQLQHRNLVRLLGFCMEGTERILVYKFIQNSSLDRFLFGHEDQGGLDWARRYKIIVGVACGIQYLHEDSRLKVIHRDLKASNVLLDADMNPKISDFGMAKFFHGDQSQENTRTGRVVGTFGYMSPEYAMHGKFSVKSDVFSFGVLVLEIISGKKNSSYYRSHDDNELLSFAWKNWIDQTPFQILDPKLRGSYSRSEVQRCIHIALLCVQENPVERPSMATIMLALNAYSVTLGLPRKPAFFVTGRATTDRLRHQLDSDQSNSSSVPFSAGDSLITQVYPR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02695 665 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Phco6g02695 665 Gene3D Transferase(Phosphotransferase) domain 1 413 617 - -
Phco6g02695 665 Gene3D - 150 252 IPR038408 -
Phco6g02695 665 Gene3D - 30 137 IPR038408 -
Phco6g02695 665 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Phco6g02695 665 ProSiteProfiles Protein kinase domain profile. 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02695 665 FunFam cysteine-rich receptor-like protein kinase 10 413 617 - -
Phco6g02695 665 FunFam Cysteine-rich receptor-like protein kinase 10 147 252 - -
Phco6g02695 665 Pfam Protein tyrosine and serine/threonine kinase 340 608 IPR001245 GO:0004672|GO:0006468
Phco6g02695 665 Pfam Salt stress response/antifungal 157 249 IPR002902 -
Phco6g02695 665 Pfam Salt stress response/antifungal 37 134 IPR002902 -
Phco6g02695 665 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Phco6g02695 665 ProSiteProfiles Gnk2-homologous domain profile. 31 137 IPR002902 -
Phco6g02695 665 SMART serkin_6 337 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02695 665 ProSiteProfiles Gnk2-homologous domain profile. 142 252 IPR002902 -
Phco6g02695 665 SUPERFAMILY Protein kinase-like (PK-like) 322 639 IPR011009 -
Phco6g02695 665 CDD STKc_IRAK 343 606 - -
Phco6g02695 665 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 34 649 - -
Phco6g02695 665 FunFam Cysteine-rich receptor-like protein kinase 10 295 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02695 Phco-Chr6 48555413 48559308 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02695 PK_Tyr_Ser-Thr 1.1e-47 CL0016