Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02694 ATGGGCATCTTGAAATCGTCTTCAACCCACTCGCTAATTCTCTCCCTGTTTGTGTTTCTAAACTTTGCAAGTGAAGCTGCTGCTACATACAGCGCACATGCCTGCACAGATGGATCCTCTTACCGACCCAACACAACCTTCCAAACCAACTTGAACCTCCTCCTCTCATCCCTCCTCTCCAACGCCACCCTCCACGACGGTTACTACCTCACCAACATCTCCCTTGGAGCCCCTGGGGAGGTCAAGGGGCTCTTCCTCTGCCGTGGTGACGTCACCCCCTCCGTCTGCCACGACTGTGTCGCCGCCGCGGCTGACAACATCACACGCCTTTGCACCAACCAAACAGAGTCTGTAATATGGTATGACGAATGTATGGTGCGCTACTCCAACCTTTCCTTCCTCAACAACATAGTCCCGAGTATTAGCTACGGTTCCCAACAGAGCGTTCCTGAATCCGATACTACTAGCTTTATCAATTTTCTTGCATCCGCGCTGAGGGGTGTGGTGCAAGATGCCATGAATTCTACTTTGGGTAAAATGTTCGCCACAAGAGAAGCGAAGTTCACGAGCTCAATGAGTCTGTACTCCCTGGCGCAGTGTAGGCCTGATTTATCCGCCTTTGATTGTAACATGTGCTTAACAGGCGGCATCAGTAGCCTCGGTGAAGGAAAACGAGGTGCACGCAGCCTGCTTCCTAGTTGTAATGTCAGATATGAATTGTACCCTTTTTACAATGTTTCCGCCGTCTCCGCTAAACCAGAGTCTCTTTCCCCATCTTCAGGAAAAAGCAGTATCTCTATAATTGTGGCTATTACTGTCCCAATTGTTGTTGCGGTGGTACTTTTCATTGTTGGCGTCTGCTTCCTACGCAAGAGGGCAAGCGATAAATACAAGAATTCTTTTGTCCAGGATTCAATTGTTGATGGTCTTACCGATGTGGAGTCATTGCAATTTGACTTGGCTACAATTGAAGCTGCCACGAACAGATTTTCAGATGAGAACAAGATTGGCCAAGGTGGATTTGGGGTGGTTTATAAGGGTGTCCTCCCTGACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTTGCCAAGCTTCAACATAGAAATTTAGTGAGACTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTATCTATGAATACATACCAAACAAAAGCCTTGATTACTTTCTATTTGATTCTATAAAGCAAAGAGAGTTAGATTGGTCAAAACGCTACAAGATTATAGTTGGCATTGCTCGAGGAATTCTTTATCTACATGAAGATTCTCAACTTAGAATTGTACACCGTGATCTCAAAGCTAGCAATGTTTTACTAGATGAAAATATGAACTCAAAAATTTCTGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTAAATACAGGAAGGATAGTTGGGACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGTCAGTTTTCTATGAAATCAGATGTGTTCAGCTTTGGTGTCTTGGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTTTATCAATCCAATCACGCTGATGACCTCTTAATCTTTGCTTGGAAGAAATGGACAGAGCAAACAACTATGGAGTTTCTGGATCCAGCTCTGAGAGGTTCTTGTTCGAGAAATGAAGTAAACAGATGCATCCACATTGGTTTATTATGTGTTCAGGAAAATCCGTCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAATAGTTATTCAGTTACCTTGTCAATGCCACGACAACCAGCATCTTTTCTGCGTGGAAGAGGTCCTAACAGGCTTAACCGAGGACTTGAATCTGATCAGTCTACCACCGATCAATCTACTTCCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCGTCACTGAAGTATACCCTCGCTAA 1983 0.4473 MGILKSSSTHSLILSLFVFLNFASEAAATYSAHACTDGSSYRPNTTFQTNLNLLLSSLLSNATLHDGYYLTNISLGAPGEVKGLFLCRGDVTPSVCHDCVAAAADNITRLCTNQTESVIWYDECMVRYSNLSFLNNIVPSISYGSQQSVPESDTTSFINFLASALRGVVQDAMNSTLGKMFATREAKFTSSMSLYSLAQCRPDLSAFDCNMCLTGGISSLGEGKRGARSLLPSCNVRYELYPFYNVSAVSAKPESLSPSSGKSSISIIVAITVPIVVAVVLFIVGVCFLRKRASDKYKNSFVQDSIVDGLTDVESLQFDLATIEAATNRFSDENKIGQGGFGVVYKGVLPDGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDYFLFDSIKQRELDWSKRYKIIVGIARGILYLHEDSQLRIVHRDLKASNVLLDENMNSKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSMKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLIFAWKKWTEQTTMEFLDPALRGSCSRNEVNRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTLSMPRQPASFLRGRGPNRLNRGLESDQSTTDQSTSCSIPWSVNEVSVTEVYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02694 660 Gene3D Transferase(Phosphotransferase) domain 1 406 612 - -
Phco6g02694 660 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02694 660 Pfam Salt stress response/antifungal 153 241 IPR002902 -
Phco6g02694 660 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Phco6g02694 660 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Phco6g02694 660 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Phco6g02694 660 Gene3D - 27 133 IPR038408 -
Phco6g02694 660 Gene3D - 141 243 IPR038408 -
Phco6g02694 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 405 - -
Phco6g02694 660 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02694 660 MobiDBLite consensus disorder prediction 628 644 - -
Phco6g02694 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Phco6g02694 660 MobiDBLite consensus disorder prediction 617 644 - -
Phco6g02694 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Phco6g02694 660 SUPERFAMILY Protein kinase-like (PK-like) 316 620 IPR011009 -
Phco6g02694 660 ProSiteProfiles Gnk2-homologous domain profile. 139 243 IPR002902 -
Phco6g02694 660 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
Phco6g02694 660 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Phco6g02694 660 Gene3D Phosphorylase Kinase; domain 1 291 405 - -
Phco6g02694 660 CDD STKc_IRAK 336 602 - -
Phco6g02694 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 657 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02694 Phco-Chr6 48549518 48552423 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02694 PK_Tyr_Ser-Thr 4e-51 CL0016