Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02693 ATGTGCATCTTGAAATCGTCTTCAACCCACTTGCTAATTCTCTCCCTGTTTGTGTTTCTAAACTTTGGAAGTGAAGCTGCTCCTACATACAGCGCACATGTCTGCACAAATGGATCCTTTTACCGACCCAACACAACATTCCAAACCAACTTGAACCTCCTCCTCTCATCTCTTGTCTCCAACGCCACCCTTCACGACGGTTTCTACCGCACCAACATCTCCCTCGGAGCCCCCGGAGAGGTCAAGGGACTCTTCCTCTGCCGCGGCGATGTCACCTCCTCCGTCTGTCACGACTGCGTCACCGCCGCAGCAAAAAACATCACTCAACGCTGCACCAACCAGATAGAGTCCATTATCTGGTACGACGAGTGCATGCTGCGCTACTCCAACAATTCCCTCAACAACATAGTCCCAGGGGTTAACTTGTTAAACGAACAAAGCGTCCCTGACACGGACTATTCACAGTTCAACAGTATTCTTGCCTCCACGTTGACTGATGTGAAACAAGAAGCTATCAGTTCGGGGAAAATGTTTTTTACAAAAGAAGCGAATGTCACGAGCTCAATGAAGCTTTACACACTGGCGCAGTGCACTCCCGATTTGTCCACTTCTGAATGTAACACGTGCTTCTCAAGCGCCATCAGTTCCATTCCAAACTGCTGTGACGGAAAACAAGGTGCACGGTCCCTGCTTCCGGGTTGTAATGTCAGATATGAATTGTACCCGTTTTACAATGTTTCCTCTGTCTCCACACAACCAGAGTTCTTCTCTCCGTCTTCAGGGAAAAGCATAATTTCTTTAATTGTGGCGATTGTTGTCCCAATTGTTGTTGCGGTTGTACTTCTCGTTGTTGGCGTCTGCTTCCTACGTAAGAGGGCAAGTAATAGATACATTAATTCTTTTGGCCAGGATTCAATTGTGGATGATCTTACTGATGTGGAGTCCTTGCAATTTGACTTGGCTACAGTTGAAGCTGCCACAAACAGATTCTCGGATGAGAACAAGATTGGGCGTGGCGGATTTGGGGTGGTTTATAAGGGTGTCCTCTGTAACGGACAGGAGATAGCAGTGAAGAGGTTGTCAGTAACCTCCTTGCAGGGTGCAGTAGAGTTCAGGAATGAAGCTGCCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGATTATTGGGATTTTGCTTGGAGGGCCAGGAAAAGATTCTTATCTATGAATATATACCAAACAAAAGCCTTGATCACTTTCTATTTGACCCTGTCAAGCAAAGAGAGTTAGATTGGTCAAGACGCTACAACATTATAATTGGTATTACTCGAGGAATTCTTTATTTACATGAAGATTCCCAACTTAGAATTATACATCGGGATATAAAAGCTAGTAATGTTTTACTGGATCAAAATATGAATCCAAAGATTTCAGATTTTGGTATGGCAAAAATTTTCCAGGCAGATCAAACTCCAGTAAACACAGGAAGGATTGTTGGGACATATGGATATATGTCTCCAGAATACGCAATGCGTGGACAATTTTCAGTGAAATCAGATGTGTTCAGCTTCGGTATCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAATGCTGATTTGTATCAATCGAAACACGCTGATGACCTCTTAAGTCTAGCTTGGAAGCATTGGACAGAGCAAACACCTATGGAGTTTCTAGATCCAACTCTGAGAGGTTCTTATTCAAGAAATGAAGTAAATAGATGCATCCATATTGGTCTATTATGTGTTCAGGAGAGTCCATCTGATAGACCATCAATGGCCACTATTGCACTTATGCTGAACAGTTATTCAGTTACCATGTCAATGCCACGGCAACCAGCATCTTTCCTGCGTGGAAGAAGTCCTAACAGGCTAAACCCAGGGCTTGACTCTGATCAGTCTACCACCAACCAGTCTACCACCAGTTCAATTCCATGGTCTGTGAATGAAGTATCCATTACGGAATTATACCCTCGCTAA 1983 0.4402 MCILKSSSTHLLILSLFVFLNFGSEAAPTYSAHVCTNGSFYRPNTTFQTNLNLLLSSLVSNATLHDGFYRTNISLGAPGEVKGLFLCRGDVTSSVCHDCVTAAAKNITQRCTNQIESIIWYDECMLRYSNNSLNNIVPGVNLLNEQSVPDTDYSQFNSILASTLTDVKQEAISSGKMFFTKEANVTSSMKLYTLAQCTPDLSTSECNTCFSSAISSIPNCCDGKQGARSLLPGCNVRYELYPFYNVSSVSTQPEFFSPSSGKSIISLIVAIVVPIVVAVVLLVVGVCFLRKRASNRYINSFGQDSIVDDLTDVESLQFDLATVEAATNRFSDENKIGRGGFGVVYKGVLCNGQEIAVKRLSVTSLQGAVEFRNEAALVAKLQHRNLVRLLGFCLEGQEKILIYEYIPNKSLDHFLFDPVKQRELDWSRRYNIIIGITRGILYLHEDSQLRIIHRDIKASNVLLDQNMNPKISDFGMAKIFQADQTPVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGILVLEIVSGKKNADLYQSKHADDLLSLAWKHWTEQTPMEFLDPTLRGSYSRNEVNRCIHIGLLCVQESPSDRPSMATIALMLNSYSVTMSMPRQPASFLRGRSPNRLNPGLDSDQSTTNQSTTSSIPWSVNEVSITELYPR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02693 660 SUPERFAMILY Protein kinase-like (PK-like) 316 627 IPR011009 -
Phco6g02693 660 FunFam cysteine-rich receptor-like protein kinase 10 406 608 - -
Phco6g02693 660 MobiDBLite consensus disorder prediction 627 645 - -
Phco6g02693 660 SMART serkin_6 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02693 660 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 36 659 - -
Phco6g02693 660 ProSiteProfiles Protein kinase domain profile. 330 605 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02693 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 290 405 - -
Phco6g02693 660 FunFam Cysteine-rich receptor-like protein kinase 10 139 243 - -
Phco6g02693 660 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 28 133 - -
Phco6g02693 660 Pfam Salt stress response/antifungal 35 130 IPR002902 -
Phco6g02693 660 Pfam Salt stress response/antifungal 151 241 IPR002902 -
Phco6g02693 660 ProSitePatterns Protein kinases ATP-binding region signature. 336 358 IPR017441 GO:0005524
Phco6g02693 660 ProSiteProfiles Gnk2-homologous domain profile. 136 243 IPR002902 -
Phco6g02693 660 ProSiteProfiles Gnk2-homologous domain profile. 29 133 IPR002902 -
Phco6g02693 660 Gene3D Phosphorylase Kinase; domain 1 295 405 - -
Phco6g02693 660 MobiDBLite consensus disorder prediction 615 645 - -
Phco6g02693 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Phco6g02693 660 Gene3D - 140 243 IPR038408 -
Phco6g02693 660 Gene3D - 27 132 IPR038408 -
Phco6g02693 660 Gene3D Transferase(Phosphotransferase) domain 1 406 613 - -
Phco6g02693 660 CDD STKc_IRAK 336 602 - -
Phco6g02693 660 Pfam Protein tyrosine and serine/threonine kinase 333 598 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02693 Phco-Chr6 48543039 48545789 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02693 PK_Tyr_Ser-Thr 1.3e-47 CL0016