Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02691 ATGATTACCAAGTCCAAAAATAATCTCAAACTCTTCCTCTTTTGCACCCTTGTGCTCACCGTTACGGAAACATCTGCTTCCGTCTTCAACAACGTTAGCTGCACGAGCAATCACACTTTCACTCCAAACACCACCTTCGACGCCAACCTCAACACCCTTCTCTCTTACCTTTCCTCCAACGTCACCAACAACTTTAGATTCTTCAACACAACGTCGGGGGAGGATTCGGACACCGTCTATGGCCTCTACATGTGCCGTGGAGACGTCCCGTTTGCTCTATGCAGAGAGTGTGTGGGTTTTGCGACACAAACCATAGCCTCGTCGTGTCCCACATCGAAAGAGGCTGTGATTTGGTACAACGAGTGTTTGTTGCGCTACTCTTATAGGTTCTTCTTCTCTAGAATGGAAGAGTGGCCGAGGCACCAGGTCAATATCCCGTTGGGGGATCCAGTTGTTTTGCACAGTAGTGGATTCTACGATGCTTTAGGGTCCATTTTTGATGAACTTCCAAATCAAGCAGCACTGGCTCTTAAAGGGTCTAATCCTTATGCCGTTAAGCAAGAAAACGCTTCTGCGAGTATTACTGTTTATGGCCTCGCTCAGTGCACACCGGACTTGGTGGCCGGAGATTGCAGACGGTGTATCGCCGATGCGGCGGCGGAATTCGCCGGGTCTTGTTGCGGAGGGAGCATAGGGGCAAGTGTTCTGTTTCCCAGTTGCATTGTTAGGTATGAAACGTATCCGTTTTATCAGCATTCAGGAACCTCCGCGCCAACAATGATTAAGGGTTCGGGAAATATTCGCACCGAAGTGATTGTGATAGTGGTTGTCTTGGTTGCCCTTTTGGTAATCTTTCTTTGCATTGGCTACTGCGGTTTCATCTGGATTAAAGGGAGAAAGAAACGCAAGGCCAGTGACCACAGAGAAAACTTTGGGCCAGAAATCAGTGTCTTGGAGTCCCTGGAATTTGATTTTGCTACAATTGAAGCAGCAACAAACAAGTTTTCTGAAGAGCGCAGGATCGGCAAAGGGGGTTACGGAGAAGTCTACAAGGGAATCCTTCCTAACGGAGAAGAAGTGGCTGTAAAGAGATTGTCAACAAATTCTAGGCAGGGAGCTGAGGAATTCAAGAATGAGGTGTTGTTAATTGCTAAACTTCAACACAAAAATTTGGTGAGGTTAATAGGATTTTGCCAAGAAGACAGAGAGAAAATACTTGTCTACGAAAATGTGCCTAACAAAAGCCTTGATCACTTTTTATTTGATCCCCAAAAACGTAGAGTATTAACTTGGTCAGAGCGGTTTAAAATCATAAAAGGAATTGCAAGAGGAATTCTTTATCTTCATGAAGACTCTCGTCTTAAGATTATACACCGTGATATCAAACCAAGCAATGTTCTATTGGACAATGACATCAATCCAAAAATTTCCGATTTTGGTATGGCAAGGATGGTAGATACAAATCATATTCAAGGATGTACGAATAGAGTTGTGGGTACATACGGGTACATGTCTCCTGAATATGCCATGCATGGACAGTTTTCTGACAAGTCTGATGTATTCAGTTTTGGAGTTATGATTCTTGAGATTATTAGTGGAAAGAAGAATTCTTGTTCTTTTGAATCATATCGTGTTGATGATCTTTTGAGTTATGCATGGAACAATTGGAGGGATGAATCACCATTTCAGTTGTTGGATCCAACTCTTGAAGAATCTTATTGTCCAAACGAAGTTGAAAAGTGTATGCAGATTGGTTTATTGTGTGTGCAAGAAAATCCTGATGAAAGACCTAAAATAGGAACCATCGTTTCATATCTTAACAACACTTCAGTTCAAATTCCAATCCCTTTAGAGCCAGCGTTTTTCATGCATGGCAGAGTAAGAAGACATTCAACTGAACATCAATCATCATCAGGTTACTCTACCAATCATTCTTTCTCCTCCTCGGTAAATAAGATCTCTACTACCATATTCTTCCCTAGATAG 1986 0.4275 MITKSKNNLKLFLFCTLVLTVTETSASVFNNVSCTSNHTFTPNTTFDANLNTLLSYLSSNVTNNFRFFNTTSGEDSDTVYGLYMCRGDVPFALCRECVGFATQTIASSCPTSKEAVIWYNECLLRYSYRFFFSRMEEWPRHQVNIPLGDPVVLHSSGFYDALGSIFDELPNQAALALKGSNPYAVKQENASASITVYGLAQCTPDLVAGDCRRCIADAAAEFAGSCCGGSIGASVLFPSCIVRYETYPFYQHSGTSAPTMIKGSGNIRTEVIVIVVVLVALLVIFLCIGYCGFIWIKGRKKRKASDHRENFGPEISVLESLEFDFATIEAATNKFSEERRIGKGGYGEVYKGILPNGEEVAVKRLSTNSRQGAEEFKNEVLLIAKLQHKNLVRLIGFCQEDREKILVYENVPNKSLDHFLFDPQKRRVLTWSERFKIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNDINPKISDFGMARMVDTNHIQGCTNRVVGTYGYMSPEYAMHGQFSDKSDVFSFGVMILEIISGKKNSCSFESYRVDDLLSYAWNNWRDESPFQLLDPTLEESYCPNEVEKCMQIGLLCVQENPDERPKIGTIVSYLNNTSVQIPIPLEPAFFMHGRVRRHSTEHQSSSGYSTNHSFSSSVNKISTTIFFPR 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02691 661 FunFam cysteine-rich receptor-like protein kinase 10 411 613 - -
Phco6g02691 661 Pfam Protein kinase domain 336 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02691 661 ProSiteProfiles Gnk2-homologous domain profile. 28 131 IPR002902 -
Phco6g02691 661 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 22 657 - -
Phco6g02691 661 SUPERFAMILY Protein kinase-like (PK-like) 321 639 IPR011009 -
Phco6g02691 661 Gene3D Transferase(Phosphotransferase) domain 1 411 613 - -
Phco6g02691 661 FunFam Cysteine-rich receptor-like protein kinase 10 297 410 - -
Phco6g02691 661 SMART serkin_6 335 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02691 661 ProSitePatterns Protein kinases ATP-binding region signature. 341 363 IPR017441 GO:0005524
Phco6g02691 661 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Phco6g02691 661 Pfam Salt stress response/antifungal 34 127 IPR002902 -
Phco6g02691 661 ProSiteProfiles Protein kinase domain profile. 335 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02691 661 ProSiteProfiles Gnk2-homologous domain profile. 139 249 IPR002902 -
Phco6g02691 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 456 468 IPR008271 GO:0004672|GO:0006468
Phco6g02691 661 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 27 131 - -
Phco6g02691 661 Gene3D - 27 131 IPR038408 -
Phco6g02691 661 Gene3D - 151 249 IPR038408 -
Phco6g02691 661 CDD STKc_IRAK 341 608 - -
Phco6g02691 661 Gene3D Phosphorylase Kinase; domain 1 297 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02691 Phco-Chr6 48529938 48533167 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02691 Pkinase 1.6e-48 CL0016