Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02689 ATGAAACTCTGCATCGTCACAGAGAACTACATTAACAAATCCATGGCATCGTGTTTCACCTATGCCATACCCTTTATCTTTTTTATCTCCCTCTGTTTTACTGAGACTAGAGCTCAGGGACTTTCCTATCAGTACCAAGTTTGCTCACCAAACAAATTCACTCCCAATACCACCTTCCAAAGCCACCTCACCACTCTATTCTCTTCCTTATCTTCAAAAGCCTCCAACAATGTCCAATTCTTCAACAATACCGTCACGGGGACAAACCCCTCCGACACAGTCTACGGACTATTCATGTGCAGAGGGGACATCCCCTCCGACCTATGTAATCACTGCGTCGGAAACGCCACACAGAGACTGTCCACACACACAGATTGTTCCTTGTCCATAGAAGCAGTGGTGTATTACGACGAGTGCATAGTTCGGTATTCCAACCTCTCTTTCTTCGGCACCGCGGACATGGAAATCAGCTCAGGCTATGTTCTGGCCAGCCCCATCAACATGACAAACCAAGAAAGCTTCAAGCGTTTGGTGTATGTGAGTTTGAACGAAACTGCGGACGAGGCAGTGAGTTCAGCTAGCGGCGGTGAGAAGTTCGCGACAAAGGAAACAGATATAGATATATTTCAGAAGCTATATTGTCTTGTACAGTGCACACCGGACCTGTCTCCCCGAGTTTGCAGAAGCTGTCTGAATAGTTTGATAAACTCGGATCTTCCACGGTGCTGTGCAGGGAGGCAGGGAGGAAGAGTTTTATATCCCAACTGCGTCATCAGGTTTGAAATTTACCCTTTTTATCGATCTCTTGGTTCGGCTCCAACGCCAACACCACCGCCGAAATTGGGAGAAAAAAAATCGACTACATCAAGAACAATTATCTTAGTTGTTGTACCCATTGTTGGTTTGGCAACTCTCTCTGCTTTCTGCTACTACTTGCTAAGGAGAAGAGCAAGAAGGAGGCTAAAGAACCTTCTTAGAGAAAATTTTGGTGAAGAAAGTTCAATTCTAGAAGGGTTGCAATTTGATTTGGCTACTATTAAATTAGCAACCGATAATTTTTCAAATGAGAGCGAGATTGGAAAAGGTGGATTCGGAGAGGTTTATAAGGGTATTCTTTCCGATGGACGACATATAGCAGTTAAAAGACTTTCAATAGATTCTAAACAAGGTAATCAACAACAAAAGTTAAGCTGGCACGAACGTTATAAAATTATAGGGGGGACTGCTCTAGGAATTCTTTATTTACATGAATATTCTCGAGTTAAAGTTATACATCGTGATCTTAAACCAAGTAATATTTTGTTAGATGAAAATATGAACCCTAAAATTTCAGATTTTGGTTTGGCTAGAATTTTTGATGTGGATCAAAATCGTGCTGAAACTGATCGAATTGTTGGAACATATGGTTATATGTCTCCAGAATATGCAATGCTTGGACAATTTTCTGAAAAATCAGATGTATTTAGTTTTGGGATTATAGTTCTTGAGATTATTACAAGTAAAAAGAATGCGCGTTCTTATGAATCACACAATATGGAGGAAGGCCTCATGACATATGTGTGGAGACATTGGAAGAATGAAACACCAATGAGTATATTAGATCCAAATATGAAAGAAAAATATTATGAAACAGAAGTTATTAGATGCATTCAAATTGGTTTATTATGTGTCCAAGAAAATCCAAATATTAGACCTACCATGGCAACAGTAGTTTCTTATCTTAATAATCATTCACTTGAATTGCCATCACCTCAAGAACCTGCCTTTTTCTTACACGGAGTAGATAAAAGAGCTATGCAGCAAGGATCAAGTTCCACCATTTCTGCCAACAGTTCCATGCCATTCTCTGTCAATGAAATGCCTACAACTAGTTTTTATCCACGATAA 1887 0.4006 MKLCIVTENYINKSMASCFTYAIPFIFFISLCFTETRAQGLSYQYQVCSPNKFTPNTTFQSHLTTLFSSLSSKASNNVQFFNNTVTGTNPSDTVYGLFMCRGDIPSDLCNHCVGNATQRLSTHTDCSLSIEAVVYYDECIVRYSNLSFFGTADMEISSGYVLASPINMTNQESFKRLVYVSLNETADEAVSSASGGEKFATKETDIDIFQKLYCLVQCTPDLSPRVCRSCLNSLINSDLPRCCAGRQGGRVLYPNCVIRFEIYPFYRSLGSAPTPTPPPKLGEKKSTTSRTIILVVVPIVGLATLSAFCYYLLRRRARRRLKNLLRENFGEESSILEGLQFDLATIKLATDNFSNESEIGKGGFGEVYKGILSDGRHIAVKRLSIDSKQGNQQQKLSWHERYKIIGGTALGILYLHEYSRVKVIHRDLKPSNILLDENMNPKISDFGLARIFDVDQNRAETDRIVGTYGYMSPEYAMLGQFSEKSDVFSFGIIVLEIITSKKNARSYESHNMEEGLMTYVWRHWKNETPMSILDPNMKEKYYETEVIRCIQIGLLCVQENPNIRPTMATVVSYLNNHSLELPSPQEPAFFLHGVDKRAMQQGSSSTISANSSMPFSVNEMPTTSFYPR 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02689 628 FunFam Cysteine-rich receptor-like protein kinase 25 158 265 - -
Phco6g02689 628 FunFam cysteine-rich receptor-like protein kinase 10 380 581 - -
Phco6g02689 628 ProSitePatterns Protein kinases ATP-binding region signature. 359 381 IPR017441 GO:0005524
Phco6g02689 628 SMART serkin_6 353 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02689 628 Pfam Protein kinase domain 393 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02689 628 ProSiteProfiles Gnk2-homologous domain profile. 41 148 IPR002902 -
Phco6g02689 628 ProSiteProfiles Gnk2-homologous domain profile. 156 265 IPR002902 -
Phco6g02689 628 Gene3D Transferase(Phosphotransferase) domain 1 390 582 - -
Phco6g02689 628 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 393 620 - -
Phco6g02689 628 Gene3D Transferase(Phosphotransferase) domain 1 341 389 - -
Phco6g02689 628 Pfam Salt stress response/antifungal 48 145 IPR002902 -
Phco6g02689 628 Pfam Salt stress response/antifungal 168 262 IPR002902 -
Phco6g02689 628 SUPERFAMILY Protein kinase-like (PK-like) 337 607 IPR011009 -
Phco6g02689 628 Gene3D - 159 265 IPR038408 -
Phco6g02689 628 Gene3D - 41 148 IPR038408 -
Phco6g02689 628 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 41 147 - -
Phco6g02689 628 ProSiteProfiles Protein kinase domain profile. 263 580 IPR000719 GO:0004672|GO:0005524|GO:0006468
Phco6g02689 628 ProSitePatterns Serine/Threonine protein kinases active-site signature. 423 435 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02689 Phco-Chr6 48512671 48516087 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Phco6g02689 Pkinase 2e-27 CL0016